RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 SEPT2Q15019 361 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 CCDC70Q6NSX1 233 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 LEKR1Q6ZMV7 388 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 FAM133AQ8N9E0 248 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 TBC1D5Q92609 795 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 NOX5Q96PH1 765 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 LTBP1Q14766 1721 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 GDF11O95390 407 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-211ENST00000553882 HYIQ5T013 277 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 TRIM59Q8IWR1 403 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 GOLGA5Q8TBA6 731 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 KCTD10Q9H3F6 313 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 ADAMTS1Q9UHI8 967 aa16.06■□□□□ 0.16
ACTN1-211ENST00000553882 SSU72P8A0A1W2PR75 194 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 MEIS2O14770 477 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 FTCDO95954 541 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 TCP1P17987 556 aaKnown RBP16.05■□□□□ 0.16
ACTN1-211ENST00000553882 AARSP49588 968 aaKnown RBP eCLIP16.05■□□□□ 0.16
ACTN1-211ENST00000553882 ARHGAP4P98171 946 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 CYP4A11Q02928 519 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 KLHDC7AQ5VTJ3 777 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 CATSPER3Q86XQ3 398 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 PACSIN2Q9UNF0 486 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-211ENST00000553882 MYO3BQ8WXR4 1341 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 ACTN1P12814 892 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 NR2F2P24468 414 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 SLC12A3P55017 1021 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-211ENST00000553882 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.169e-7■□□□□ 8.5
ACTN1-211ENST00000553882 PACSIN1Q9BY11 444 aa16.05■□□□□ 0.16
ACTN1-211ENST00000553882 RBM12Q9NTZ6 932 aaKnown RBP16.05■□□□□ 0.16
ACTN1-211ENST00000553882 A0A087X0T9 212 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 PJA2O43164 708 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 SERPING1P05155 500 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 FAM228BP0C875 321 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 FOXR1Q6PIV2 292 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 HHIPL2Q6UWX4 724 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 MMGT1Q8N4V1 131 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 CEP63Q96MT8 703 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 AFF2P51816 1311 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 AGPSO00116 658 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 PALMO75781 387 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 PRPF6O94906 941 aaKnown RBP16.04■□□□□ 0.16
ACTN1-211ENST00000553882 KLRC1P26715 233 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 HOXA13P31271 388 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-211ENST00000553882 PAFAH1B1P43034 410 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 USP11P51784 963 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 RNASE9P60153 205 aaKnown RBP16.04■□□□□ 0.16
ACTN1-211ENST00000553882 KCNH2Q12809 1159 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 GOLGA6L1Q8N7Z2 621 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 CCDC17Q96LX7 622 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 DHX36Q9H2U1 1008 aaKnown RBP16.04■□□□□ 0.16
ACTN1-211ENST00000553882 FAM184BQ9ULE4 1060 aa16.04■□□□□ 0.16
ACTN1-211ENST00000553882 GOLGA6BA6NDN3 693 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 FAM86B1E9PN63 330 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 FAM86B2P0C5J1 330 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 PRLRP16471 622 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 ICA1Q05084 483 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 KLHL30Q0D2K2 578 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 KIAA0753Q2KHM9 967 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 CYP2W1Q8TAV3 490 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 AENQ8WTP8 325 aaKnown RBP16.03■□□□□ 0.16
ACTN1-211ENST00000553882 EDEM3Q9BZQ6 932 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-211ENST00000553882 LRRC37AA6NMS7 1700 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 CETN3O15182 167 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 SKIDA1Q1XH10 827 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 HAUS3Q68CZ6 603 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 SIAH1Q8IUQ4 282 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 ETNPPLQ8TBG4 499 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 AFAP1L1Q8TED9 768 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 REEP2Q9BRK0 252 aa16.03■□□□□ 0.16
ACTN1-211ENST00000553882 RSPH10B2B2RC85 870 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 F5H6K3 240 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 GNA14O95837 355 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 RSPH10BP0C881 870 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 KLRC3Q07444 240 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 PTPROQ16827 1216 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 C8orf74Q6P047 294 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 FOXR2Q6PJQ5 311 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 SH3BP5LQ7L8J4 393 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 SLFN12Q8IYM2 578 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 FAM198AQ9UFP1 575 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 LCMT1Q9UIC8 334 aa16.02■□□□□ 0.16
ACTN1-211ENST00000553882 RBAK-RBAKDNI3L0D1 243 aa16.02■□□□□ 0.15
ACTN1-211ENST00000553882 SLC9A1P19634 815 aa16.02■□□□□ 0.15
ACTN1-211ENST00000553882 GIT2Q14161 759 aa16.02■□□□□ 0.15
ACTN1-211ENST00000553882 SLC18A3Q16572 532 aa16.02■□□□□ 0.15
ACTN1-211ENST00000553882 DCAF17Q5H9S7 520 aaPredicted RBP16.02■□□□□ 0.15
ACTN1-211ENST00000553882 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.15
ACTN1-211ENST00000553882 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.15
ACTN1-211ENST00000553882 EHD4Q9H223 541 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms