RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 ZNF746Q6NUN9 644 aaPredicted RBP10.58□□□□□ -0.72
CHD8-206ENST00000553870 PIK3AP1Q6ZUJ8 805 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 PLPPR4Q7Z2D5 763 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 C7orf31Q8N865 590 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 RDM1Q8NG50 284 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 SLC5A5Q92911 643 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 INTS4Q96HW7 963 aaKnown RBP10.58□□□□□ -0.72
CHD8-206ENST00000553870 LBHD1Q9BQE6 289 aaPredicted RBP10.58□□□□□ -0.72
CHD8-206ENST00000553870 PDLIM7Q9NR12 457 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 ERAP1Q9NZ08 941 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 DDX25Q9UHL0 483 aaKnown RBP10.58□□□□□ -0.72
CHD8-206ENST00000553870 TBX21Q9UL17 535 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 SMC3Q9UQE7 1217 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 SCN10AQ9Y5Y9 1956 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 IGKV6D-21A0A0A0MT36 114 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 MSH4O15457 936 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 TIMP1P01033 207 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 RAG1P15918 1043 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 U2AF2P26368 475 aaKnown RBP eCLIP10.57□□□□□ -0.723e-13■■■■□ 20.6
CHD8-206ENST00000553870 SFNP31947 248 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 TRAPPC10P48553 1259 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 STAT5BP51692 787 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 NR5A1Q13285 461 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 ORC2Q13416 577 aaPredicted RBP10.57□□□□□ -0.72
CHD8-206ENST00000553870 LETM2Q2VYF4 491 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 FAM47CQ5HY64 1035 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 MIS18BP1Q6P0N0 1132 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 ABHD15Q6UXT9 468 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 GLG1Q92896 1179 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 GDF15Q99988 308 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 AZI2Q9H6S1 392 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 PKD2L1Q9P0L9 805 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 HDAC6Q9UBN7 1215 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 GTF2IRD1Q9UHL9 959 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 ZMYND8Q9ULU4 1186 aaPredicted RBP10.57□□□□□ -0.72
CHD8-206ENST00000553870 PCDHA10Q9Y5I2 948 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 EMSYQ7Z589 1322 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 NRCAMQ92823 1304 aa10.57□□□□□ -0.72
CHD8-206ENST00000553870 A0A1W2PPC1 479 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 TRIM43BA6NCK2 446 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 K7ELQ4 463 aaPredicted RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 SORBS3O60504 671 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 B4GALT4O60513 344 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 CCNT1O60563 726 aaKnown RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 GAS7O60861 476 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 DTNBO60941 627 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 PSMD10O75832 226 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 BAG4O95429 457 aaKnown RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 PSAPP07602 524 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 ZNF286BP0CG31 522 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 PDIA4P13667 645 aaKnown RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 PDCP20941 246 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 GJB2P29033 226 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 HOXC8P31273 242 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 SP4Q02446 784 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 BFSP2Q13515 415 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 GNL2Q13823 731 aaKnown RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 PTGISQ16647 500 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 UTP14CQ5TAP6 766 aaKnown RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 LRCH2Q5VUJ6 765 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 FAM160B1Q5W0V3 765 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 LARP1BQ659C4 914 aaKnown RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 AFAP1L1Q8TED9 768 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 TRIM43Q96BQ3 446 aaPredicted RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 TEKT3Q9BXF9 490 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 KCNMB3Q9NPA1 279 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 PRDM5Q9NQX1 630 aaPredicted RBP10.56□□□□□ -0.72
CHD8-206ENST00000553870 ALPK3Q96L96 1907 aa10.56□□□□□ -0.72
CHD8-206ENST00000553870 C17orf102A2RUQ5 167 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 RRN3P2A6NIE6 340 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 WDR64B1ANS9 1081 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 H3BQV1 296 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 PITPNM1O00562 1244 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 MARCH6O60337 910 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 PARNO95453 639 aaKnown RBP10.55□□□□□ -0.72
CHD8-206ENST00000553870 TDP2O95551 362 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 CCNE2O96020 404 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 RPLP2P05387 115 aaKnown RBP10.55□□□□□ -0.72
CHD8-206ENST00000553870 SYN1P17600 705 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 JAK3P52333 1124 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 PTK7Q13308 1070 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 EARS2Q5JPH6 523 aaKnown RBP10.55□□□□□ -0.72
CHD8-206ENST00000553870 MFSD5Q6N075 450 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 NOSTRINQ8IVI9 506 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 TMEM199Q8N511 208 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 CCDC155Q8N6L0 562 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 ETNPPLQ8TBG4 499 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 CAGE1Q8TC20 777 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 PCYT2Q99447 389 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 TRPV6Q9H1D0 765 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 PRO3102Q9H379 93 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 RNPEPQ9H4A4 650 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 TRMT13Q9NUP7 481 aaKnown RBP10.55□□□□□ -0.72
CHD8-206ENST00000553870 NOL7Q9UMY1 257 aaKnown RBP10.55□□□□□ -0.72
CHD8-206ENST00000553870 NOD1Q9Y239 953 aa10.55□□□□□ -0.72
CHD8-206ENST00000553870 MAFBQ9Y5Q3 323 aaPredicted RBP10.55□□□□□ -0.72
CHD8-206ENST00000553870 DDX39AO00148 427 aaKnown RBP10.54□□□□□ -0.72
CHD8-206ENST00000553870 SMIM10L2AP0DMW4 78 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms