RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 SETQ01105 290 aaPredicted RBP23.17■■□□□ 1.3
FOXA1-203ENST00000553751 WASF1Q92558 559 aa23.17■■□□□ 1.3
FOXA1-203ENST00000553751 DHX38Q92620 1227 aaKnown RBP23.17■■□□□ 1.3
FOXA1-203ENST00000553751 LENG9Q96B70 501 aa23.17■■□□□ 1.3
FOXA1-203ENST00000553751 EMSYQ7Z589 1322 aa23.16■■□□□ 1.3
FOXA1-203ENST00000553751 DHX15O43143 795 aaKnown RBP23.16■■□□□ 1.3
FOXA1-203ENST00000553751 XBP1P17861 261 aa23.16■■□□□ 1.3
FOXA1-203ENST00000553751 ZNF200P98182 395 aaPredicted RBP23.16■■□□□ 1.3
FOXA1-203ENST00000553751 TBCKQ8TEA7 893 aa23.16■■□□□ 1.3
FOXA1-203ENST00000553751 SCLYQ96I15 445 aa23.16■■□□□ 1.3
FOXA1-203ENST00000553751 LRCH3Q96II8 777 aa23.16■■□□□ 1.3
FOXA1-203ENST00000553751 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.16■■□□□ 1.35e-24■■□□□ 13.3
FOXA1-203ENST00000553751 UPF2Q9HAU5 1272 aaKnown RBP23.16■■□□□ 1.3
FOXA1-203ENST00000553751 IL23AQ9NPF7 189 aa23.16■■□□□ 1.3
FOXA1-203ENST00000553751 ACRP10323 421 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 USP11P51784 963 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 ACTR2P61160 394 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 RBL2Q08999 1139 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 RABEP1Q15276 862 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 PRR16Q569H4 304 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 CAGE1Q8TC20 777 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 VWCEQ96DN2 955 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 PCYT2Q99447 389 aa23.15■■□□□ 1.3
FOXA1-203ENST00000553751 C17orf102A2RUQ5 167 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 IPO5O00410 1097 aaKnown RBP23.14■■□□□ 1.29
FOXA1-203ENST00000553751 LGR5O75473 907 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 CCNE2O96020 404 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 PTK7Q13308 1070 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 BFSP2Q13515 415 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 TMEM240Q5SV17 173 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 PSRC1Q6PGN9 363 aaPredicted RBP23.14■■□□□ 1.29
FOXA1-203ENST00000553751 KRT25Q7Z3Z0 450 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 CCDC155Q8N6L0 562 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 WNT8BQ93098 351 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 RNPC3Q96LT9 517 aaKnown RBP23.14■■□□□ 1.29
FOXA1-203ENST00000553751 UIMC1Q96RL1 719 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 ZNF577Q9BSK1 485 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 RNPEPQ9H4A4 650 aa23.14■■□□□ 1.29
FOXA1-203ENST00000553751 DDX39AO00148 427 aaKnown RBP23.13■■□□□ 1.29
FOXA1-203ENST00000553751 NONOQ15233 471 aaKnown RBP eCLIP23.13■■□□□ 1.29
FOXA1-203ENST00000553751 TRIM71Q2Q1W2 868 aaKnown RBP23.13■■□□□ 1.29
FOXA1-203ENST00000553751 SERINC5Q86VE9 423 aa23.13■■□□□ 1.29
FOXA1-203ENST00000553751 CCDC83Q8IWF9 413 aa23.13■■□□□ 1.29
FOXA1-203ENST00000553751 OXER1Q8TDS5 423 aa23.13■■□□□ 1.29
FOXA1-203ENST00000553751 ERAP1Q9NZ08 941 aa23.13■■□□□ 1.29
FOXA1-203ENST00000553751 GTF3C3Q9Y5Q9 886 aa23.13■■□□□ 1.29
FOXA1-203ENST00000553751 LAMA2P24043 3122 aaKnown RBP23.13■■□□□ 1.29
FOXA1-203ENST00000553751 TRIP12Q14669 1992 aaPredicted RBP23.12■■□□□ 1.29
FOXA1-203ENST00000553751 ATG7O95352 703 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 IQCF3P0C7M6 154 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 SCN5AQ14524 2016 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 ZNF365Q70YC5 407 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 RETREG2Q8NC44 543 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 AFAP1L1Q8TED9 768 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 GLG1Q92896 1179 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 ZSCAN31Q96LW9 406 aaPredicted RBP23.12■■□□□ 1.29
FOXA1-203ENST00000553751 TBC1D32Q96NH3 1257 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 SMARCAD1Q9H4L7 1026 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 SH2B1Q9NRF2 756 aaPredicted RBP23.12■■□□□ 1.29
FOXA1-203ENST00000553751 SETD4Q9NVD3 440 aa23.12■■□□□ 1.29
FOXA1-203ENST00000553751 MSH4O15457 936 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 TDP2O95551 362 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 MARK3P27448 753 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 ADAM17P78536 824 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 INF2Q27J81 1249 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 RASIP1Q5U651 963 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 LMBR1Q8WVP7 490 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 ATP6V0A1Q93050 837 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 TBC1D22BQ9NU19 505 aa23.11■■□□□ 1.29
FOXA1-203ENST00000553751 CYP3A7-CYP3A51PA0A087WV96 503 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 IGKV6D-21A0A0A0MT36 114 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 CCDC194A0A1B0GVG4 234 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 TREHO43280 583 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 SLC34A2O95436 690 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 CKBP12277 381 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 SELPP16109 830 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 CYP3A7P24462 503 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 RFC2P35250 354 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 Q4G0T1 1027 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 MOXD1Q6UVY6 613 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 ABHD15Q6UXT9 468 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 MBOAT7Q96N66 472 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 LLPHQ9BRT6 129 aaKnown RBP23.1■■□□□ 1.29
FOXA1-203ENST00000553751 AZI2Q9H6S1 392 aa23.1■■□□□ 1.29
FOXA1-203ENST00000553751 NRCAMQ92823 1304 aa23.09■■□□□ 1.29
FOXA1-203ENST00000553751 PFKMP08237 780 aa23.09■■□□□ 1.29
FOXA1-203ENST00000553751 TRAF7Q6Q0C0 670 aa23.09■■□□□ 1.29
FOXA1-203ENST00000553751 LRRC8DQ7L1W4 858 aa23.09■■□□□ 1.29
FOXA1-203ENST00000553751 PLPPR4Q7Z2D5 763 aa23.09■■□□□ 1.29
FOXA1-203ENST00000553751 RPUSD2Q8IZ73 545 aaKnown RBP23.09■■□□□ 1.29
FOXA1-203ENST00000553751 TNFRSF25Q93038 417 aa23.09■■□□□ 1.29
FOXA1-203ENST00000553751 FGBP02675 491 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 MMP1P03956 469 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 GNAT1P11488 350 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 KRT2P35908 639 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 STAT5BP51692 787 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 PPFIA1Q13136 1202 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 NR5A1Q13285 461 aa23.08■■□□□ 1.29
FOXA1-203ENST00000553751 EARS2Q5JPH6 523 aaKnown RBP23.08■■□□□ 1.29
FOXA1-203ENST00000553751 ZNF746Q6NUN9 644 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms