RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 MUTYHQ9UIF7 546 aa13.66□□□□□ -0.22
SRP54-203ENST00000553544 RWDD3Q9Y3V2 267 aa13.66□□□□□ -0.22
SRP54-203ENST00000553544 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
SRP54-203ENST00000553544 SIP14410 1827 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 KLRF2D3W0D1 207 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 HOXC8P31273 242 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 CTNNB1P35222 781 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 HSD17B4P51659 736 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 GRM4Q14833 912 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 CLUL1Q15846 466 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 SLC35G1Q2M3R5 365 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 RNF135Q8IUD6 432 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 SNX27Q96L92 541 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 PRRX2Q99811 253 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 MTA3Q9BTC8 594 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 IGFLR1Q9H665 355 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 MYO7AQ13402 2215 aa13.65□□□□□ -0.22
SRP54-203ENST00000553544 ERICH2A1L162 156 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 STXBP3O00186 592 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
SRP54-203ENST00000553544 SLC27A2O14975 620 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 MBTPS2O43462 519 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 CTSHP09668 335 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 GHRHRQ02643 423 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 DLX2Q07687 328 aaPredicted RBP13.64□□□□□ -0.23
SRP54-203ENST00000553544 HYAL1Q12794 435 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
SRP54-203ENST00000553544 WTAPQ15007 396 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 SART3Q15020 963 aaKnown RBP13.64□□□□□ -0.23
SRP54-203ENST00000553544 PGM5Q15124 567 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 BMP8AQ7Z5Y6 402 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 PBXIP1Q96AQ6 731 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 RIOX1Q9H6W3 641 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 SETD4Q9NVD3 440 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 PCDHA1Q9Y5I3 950 aa13.64□□□□□ -0.23
SRP54-203ENST00000553544 GRM6O15303 877 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 CYTH3O43739 400 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 LGALS2P05162 132 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 UBA1P22314 1058 aaKnown RBP13.63□□□□□ -0.23
SRP54-203ENST00000553544 CCND2P30279 289 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 TRAF1Q13077 416 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 SMAD4Q13485 552 aaKnown RBP13.63□□□□□ -0.23
SRP54-203ENST00000553544 FAM26DQ5JW98 314 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 CREB3L3Q68CJ9 461 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 CCDC136Q96JN2 1154 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 MAP3K14Q99558 947 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 OSBPL7Q9BZF2 842 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 LY9Q9HBG7 655 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 ANO2Q9NQ90 1003 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 CD207Q9UJ71 328 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 C5orf42Q9H799 3197 aa13.63□□□□□ -0.23
SRP54-203ENST00000553544 MYH7BA7E2Y1 1941 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
SRP54-203ENST00000553544 ENPP3O14638 875 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 OPLAHO14841 1288 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 ZBTB5O15062 677 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 ST18O60284 1047 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 PPP1R11O60927 126 aaPredicted RBP13.62□□□□□ -0.23
SRP54-203ENST00000553544 POLR2MP0CAP2 368 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 HOXA13P31271 388 aaPredicted RBP13.62□□□□□ -0.23
SRP54-203ENST00000553544 PTPN5P54829 565 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 ADAM15Q13444 863 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 NEDD9Q14511 834 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 TRIM67Q6ZTA4 783 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 CLP1Q92989 425 aaKnown RBP13.62□□□□□ -0.23
SRP54-203ENST00000553544 PPP2R3CQ969Q6 453 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 PLVAPQ9BX97 442 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 MICAL3Q7RTP6 2002 aa13.62□□□□□ -0.23
SRP54-203ENST00000553544 TMEM221A6NGB7 291 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 M0R296 226 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 PRC1O43663 620 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 MCM5P33992 734 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 BTG3Q14201 252 aaPredicted RBP13.61□□□□□ -0.23
SRP54-203ENST00000553544 GNPTABQ3T906 1256 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 IER5LQ5T953 404 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 CATIPQ7Z7H3 387 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 FCHSD1Q86WN1 690 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 GPKOWQ92917 476 aaPredicted RBP eCLIP13.61□□□□□ -0.23
SRP54-203ENST00000553544 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
SRP54-203ENST00000553544 TMEM87BQ96K49 555 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 PHOX2BQ99453 314 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 BCAS3Q9H6U6 928 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 ZNF215Q9UL58 517 aaPredicted RBP13.61□□□□□ -0.23
SRP54-203ENST00000553544 PLAGL2Q9UPG8 496 aa13.61□□□□□ -0.23
SRP54-203ENST00000553544 ZNF318Q5VUA4 2279 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
SRP54-203ENST00000553544 CDC45O75419 566 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 STAM2O75886 525 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 EYA4O95677 639 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 CHRNA1P02708 482 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 LINC00271P0C7V0 271 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.23
SRP54-203ENST00000553544 LIFRP42702 1097 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 NDUFV1P49821 464 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 ARHGAP4P98171 946 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 TSGA10IPQ3SY00 556 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 NAALADL2Q58DX5 795 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 METTL7BQ6UX53 244 aa13.6□□□□□ -0.23
SRP54-203ENST00000553544 CYFIP1Q7L576 1253 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms