RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 ATP9AO75110 1047 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 UPP2O95045 317 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 CHRNA1P02708 482 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 KCNA5P22460 613 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 SP4Q02446 784 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 GPM6BQ13491 265 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 TAF2Q6P1X5 1199 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 RPAINQ86UA6 219 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 TMEM192Q8IY95 271 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.79□□□□□ -0.68
CHD8-203ENST00000553283 GPRASP2Q96D09 838 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 CDHR1Q96JP9 859 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 LRFN3Q9BTN0 628 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 IFIH1Q9BYX4 1025 aaKnown RBP10.79□□□□□ -0.68
CHD8-203ENST00000553283 CD320Q9NPF0 282 aa10.79□□□□□ -0.68
CHD8-203ENST00000553283 GSTTP1A0A1W2PQM5 241 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 CCDC69A6NI79 296 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 PI4K2BG5E9Z4 385 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 SH2B2O14492 632 aaPredicted RBP10.78□□□□□ -0.68
CHD8-203ENST00000553283 GPR37L1O60883 481 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 KCNA2P16389 499 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 ITGB5P18084 799 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 MCM5P33992 734 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 TCF7P36402 384 aaPredicted RBP10.78□□□□□ -0.68
CHD8-203ENST00000553283 PLA2G5P39877 138 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 TMEM31Q5JXX7 168 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 NFXL1Q6ZNB6 911 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 FAM178BQ8IXR5 827 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 CMTR1Q8N1G2 835 aaKnown RBP10.78□□□□□ -0.68
CHD8-203ENST00000553283 SEPT1Q8WYJ6 367 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 KHSRPQ92945 711 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHD8-203ENST00000553283 FAM122AQ96E09 287 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 IL17RAQ96F46 866 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 TMEM87BQ96K49 555 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 EHMT1Q9H9B1 1298 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 UBIAD1Q9Y5Z9 338 aa10.78□□□□□ -0.68
CHD8-203ENST00000553283 MBLAC1A4D2B0 266 aaPredicted RBP10.77□□□□□ -0.69
CHD8-203ENST00000553283 ENPP3O14638 875 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 MAFGO15525 162 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 CALM1P0DP23 149 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 CALM2P0DP24 149 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 CALM3P0DP25 149 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 GHRP10912 638 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 LIFRP42702 1097 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 PPFIA1Q13136 1202 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 PUS10Q3MIT2 529 aaKnown RBP10.77□□□□□ -0.69
CHD8-203ENST00000553283 TIGD5Q53EQ6 642 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 PTCRAQ6ISU1 281 aaPredicted RBP10.77□□□□□ -0.69
CHD8-203ENST00000553283 RUFY4Q6ZNE9 571 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 RSPH3Q86UC2 560 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 GJD3Q8N144 294 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 FIBCD1Q8N539 461 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 BANK1Q8NDB2 785 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 NEK9Q8TD19 979 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 LSG1Q9H089 658 aaKnown RBP10.77□□□□□ -0.69
CHD8-203ENST00000553283 SMARCAD1Q9H4L7 1026 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 ERAP1Q9NZ08 941 aa10.77□□□□□ -0.69
CHD8-203ENST00000553283 ARIH1Q9Y4X5 557 aaPredicted RBP10.77□□□□□ -0.69
CHD8-203ENST00000553283 COL4A4P53420 1690 aaPredicted RBP10.76□□□□□ -0.69
CHD8-203ENST00000553283 MICAL3Q7RTP6 2002 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 SPDYE3A6NKU9 549 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 C5orf67F2Z3F1 127 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 SLC27A2O14975 620 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 RB1P06400 928 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 RXRAP19793 462 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 BMPR1AP36894 532 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 MGAT3Q09327 533 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 MTMR1Q13613 665 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 COL9A3Q14050 684 aaPredicted RBP10.76□□□□□ -0.69
CHD8-203ENST00000553283 LPIN1Q14693 890 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 GRIK4Q16099 956 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 TCEAL5Q5H9L2 206 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 MARCH8Q5T0T0 291 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 FANCBQ8NB91 859 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 GLG1Q92896 1179 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 NSUN3Q9H649 340 aaKnown RBP10.76□□□□□ -0.69
CHD8-203ENST00000553283 C11orf16Q9NQ32 467 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 JADE2Q9NQC1 790 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 PKD2L1Q9P0L9 805 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 PCDHA6Q9UN73 950 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 PCDHA8Q9Y5H6 950 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 SLC12A7Q9Y666 1083 aa10.76□□□□□ -0.69
CHD8-203ENST00000553283 hCG_1642624A0A1W2PR95 340 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 RRN3P2A6NIE6 340 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 H3BQ06 376 aaPredicted RBP10.75□□□□□ -0.69
CHD8-203ENST00000553283 NCK2O43639 380 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 RPLP2P05387 115 aaKnown RBP10.75□□□□□ -0.69
CHD8-203ENST00000553283 LINC00271P0C7V0 271 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 IL9P15248 144 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 MARK3P27448 753 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 SSTR3P32745 418 aaPredicted RBP10.75□□□□□ -0.69
CHD8-203ENST00000553283 CTNNB1P35222 781 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 NECTIN1Q15223 517 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 UBE2SQ16763 222 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 FBXO47Q5MNV8 452 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 CREB3L3Q68CJ9 461 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 TMTC3Q6ZXV5 915 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms