RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ZSCAN31Q96LW9 406 aaPredicted RBP12.76□□□□□ -0.37
RAB5B-208ENST00000550283 MBOAT7Q96N66 472 aa12.76□□□□□ -0.37
RAB5B-208ENST00000550283 OSBPL7Q9BZF2 842 aa12.76□□□□□ -0.37
RAB5B-208ENST00000550283 RNPEPQ9H4A4 650 aa12.76□□□□□ -0.37
RAB5B-208ENST00000550283 EHMT1Q9H9B1 1298 aa12.76□□□□□ -0.37
RAB5B-208ENST00000550283 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
RAB5B-208ENST00000550283 DCDC2CA8MYV0 355 aa12.75□□□□□ -0.37
RAB5B-208ENST00000550283 ZNF76P36508 570 aa12.75□□□□□ -0.37
RAB5B-208ENST00000550283 ACTR2P61160 394 aa12.75□□□□□ -0.37
RAB5B-208ENST00000550283 GPNMBQ14956 572 aa12.75□□□□□ -0.37
RAB5B-208ENST00000550283 C9orf50Q5SZB4 431 aa12.75□□□□□ -0.37
RAB5B-208ENST00000550283 NIPA1Q7RTP0 329 aa12.75□□□□□ -0.37
RAB5B-208ENST00000550283 DIS3L2Q8IYB7 885 aaKnown RBP12.75□□□□□ -0.37
RAB5B-208ENST00000550283 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
RAB5B-208ENST00000550283 NOC4LQ9BVI4 516 aaKnown RBP12.75□□□□□ -0.37
RAB5B-208ENST00000550283 JPH1Q9HDC5 661 aaPredicted RBP12.75□□□□□ -0.37
RAB5B-208ENST00000550283 SH2B1Q9NRF2 756 aaPredicted RBP12.75□□□□□ -0.37
RAB5B-208ENST00000550283 CUL9Q8IWT3 2517 aa12.75□□□□□ -0.37
RAB5B-208ENST00000550283 NFASCO94856 1347 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 CYP3A7-CYP3A51PA0A087WV96 503 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 H3BRB1 525 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
RAB5B-208ENST00000550283 NOP56O00567 594 aaKnown RBP12.74□□□□□ -0.37
RAB5B-208ENST00000550283 SOX1O00570 391 aaPredicted RBP12.74□□□□□ -0.37
RAB5B-208ENST00000550283 KPNA6O60684 536 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 SMIM10L2AP0DMW4 78 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 SMIM10L2BP0DMW5 78 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 ATP4AP20648 1035 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 CYP3A7P24462 503 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 MARK3P27448 753 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 HOXC8P31273 242 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 CCL23P55773 120 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 NONOQ15233 471 aaKnown RBP eCLIP12.74□□□□□ -0.37
RAB5B-208ENST00000550283 TCTN1Q2MV58 587 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 TRIM71Q2Q1W2 868 aaKnown RBP12.74□□□□□ -0.37
RAB5B-208ENST00000550283 NFRKBQ6P4R8 1299 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 TRAF7Q6Q0C0 670 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 KRT25Q7Z3Z0 450 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 CCDC60Q8IWA6 550 aaPredicted RBP12.74□□□□□ -0.37
RAB5B-208ENST00000550283 ETNPPLQ8TBG4 499 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 SCLYQ96I15 445 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 ZNF577Q9BSK1 485 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 TUT1Q9H6E5 874 aaKnown RBP12.74□□□□□ -0.37
RAB5B-208ENST00000550283 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 SLC9A2Q9UBY0 812 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 TRIOBPQ9H2D6 2365 aa12.74□□□□□ -0.37
RAB5B-208ENST00000550283 A0A0C4DFX4 3053 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 ST18O60284 1047 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 LGR5O75473 907 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 ATG7O95352 703 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 TIMP1P01033 207 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 ACRP10323 421 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 CSF2RAP15509 400 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 KRT2P35908 639 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 USP11P51784 963 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 ADAM17P78536 824 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 UGCGQ16739 394 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 LETM2Q2VYF4 491 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 BRDTQ58F21 947 aaPredicted RBP12.73□□□□□ -0.37
RAB5B-208ENST00000550283 GALNT17Q6IS24 598 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 B3GNT9Q6UX72 402 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 ABHD15Q6UXT9 468 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 SESTD1Q86VW0 696 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 TRAPPC12Q8WVT3 735 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 SEPT1Q8WYJ6 367 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 HAS1Q92839 578 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 SLC5A5Q92911 643 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 CDHR1Q96JP9 859 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 UNC45AQ9H3U1 944 aa12.73□□□□□ -0.37
RAB5B-208ENST00000550283 IGKV6D-21A0A0A0MT36 114 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 CCDC194A0A1B0GVG4 234 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 MAFGO15525 162 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 TREHO43280 583 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 PSMD10O75832 226 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 RAG1P15918 1043 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 CUL4AQ13619 759 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 NBR1Q14596 966 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 SHHQ15465 462 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 PTGISQ16647 500 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 Q4G0T1 1027 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 MARCH8Q5T0T0 291 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 MCTP2Q6DN12 878 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 RUFY4Q6ZNE9 571 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 FAM177A1Q8N128 213 aaPredicted RBP12.72□□□□□ -0.37
RAB5B-208ENST00000550283 FBXO18Q8NFZ0 1043 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 WASF1Q92558 559 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 HIPK3Q9H422 1215 aa12.72□□□□□ -0.37
RAB5B-208ENST00000550283 TRIP12Q14669 1992 aaPredicted RBP12.72□□□□□ -0.37
RAB5B-208ENST00000550283 SCN5AQ14524 2016 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 MROH7Q68CQ1 1323 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 EMSYQ7Z589 1322 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 EML1O00423 815 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 ZNF862O60290 1169 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 SUPT20HL2P0C7V6 817 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 GJB2P29033 226 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 BMP8BP34820 402 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 MBTPS1Q14703 1052 aa12.71□□□□□ -0.37
RAB5B-208ENST00000550283 PLCB4Q15147 1175 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms