RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	SMIM10L2A	P0DMW4	78 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SMIM10L2B	P0DMW5	78 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CIITA	P33076	1130 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	USP11	P51784	963 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	PTK7	Q13308	1070 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	PRR16	Q569H4	304 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TBCK	Q8TEA7	893 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	IL23A	Q9NPF7	189 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	KCNJ14	Q9UNX9	436 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	EMSY	Q7Z589	1322 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	PFKM	P08237	780 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	GNAT1	P11488	350 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	FDPS	P14324	419 aa	Known RBP	13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	HOXC8	P31273	242 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	RFC2	P35250	354 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ACTR2	P61160	394 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	RBL2	Q08999	1139 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	NONO	Q15233	471 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TMEM240	Q5SV17	173 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	C16orf59	Q7L2K0	433 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	KRT25	Q7Z3Z0	450 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	RPUSD2	Q8IZ73	545 aa	Known RBP	13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	AFAP1L1	Q8TED9	768 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	GLG1	Q92896	1179 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SCLY	Q96I15	445 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	LRCH3	Q96II8	777 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	1e-15	■■□□□ 11.7
ARFGAP1-223	ENST00000550188	ZNF577	Q9BSK1	485 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SMARCAD1	Q9H4L7	1026 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	AZI2	Q9H6S1	392 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TBC1D22B	Q9NU19	505 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ERAP1	Q9NZ08	941 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TCEAL9	Q9UHQ7	104 aa		13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	RANBP2	P49792	3224 aa	Known RBP	13.56	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CCDC194	A0A1B0GVG4	234 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	DDX39A	O00148	427 aa	Known RBP	13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	DTNB	O60941	627 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	LGR5	O75473	907 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	IQCF3	P0C7M6	154 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ACR	P10323	421 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ZNF200	P98182	395 aa	Predicted RBP	13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ST3GAL1	Q11201	340 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	GPR153	Q6NV75	609 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ZNF365	Q70YC5	407 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SERINC5	Q86VE9	423 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	DHX38	Q92620	1227 aa	Known RBP	13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ATP6V0A1	Q93050	837 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	LENG9	Q96B70	501 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	MTIF3	Q9H2K0	278 aa	Known RBP	13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	RNPEP	Q9H4A4	650 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	BRMS1	Q9HCU9	246 aa		13.55	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	DNAH12	Q6ZR08	3092 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	DHX15	O43143	795 aa	Known RBP	13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	JAK2	O60674	1132 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ATG7	O95352	703 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SLC34A2	O95436	690 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	PARN	O95453	639 aa	Known RBP	13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CCNE2	O96020	404 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	FGB	P02675	491 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CKB	P12277	381 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SELP	P16109	830 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	MARK3	P27448	753 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TRIM29	Q14134	588 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	HIC1	Q14526	733 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	MOXD1	Q6UVY6	613 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	LRRC8D	Q7L1W4	858 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CCDC83	Q8IWF9	413 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	LMBR1	Q8WVP7	490 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	HERVK_113	Q902F9	699 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TNPO1	Q92973	898 aa	Known RBP	13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	PCYT2	Q99447	389 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	LLPH	Q9BRT6	129 aa	Known RBP	13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	GJB4	Q9NTQ9	266 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SETD4	Q9NVD3	440 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	NRCAM	Q92823	1304 aa		13.54	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TRIOBP	Q9H2D6	2365 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TREH	O43280	583 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	EDIL3	O43854	480 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CYP3A7	P24462	503 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	KRT2	P35908	639 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SLC26A2	P50443	739 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	STAT5B	P51692	787 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SMAD3	P84022	425 aa	Known RBP	13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	KRT76	Q01546	638 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	PPFIA1	Q13136	1202 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	BECN1	Q14457	450 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	INF2	Q27J81	1249 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	TRIM71	Q2Q1W2	868 aa	Known RBP	13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188		Q4G0T1	1027 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	RASIP1	Q5U651	963 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	FAM160B1	Q5W0V3	765 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	MIS18BP1	Q6P0N0	1132 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ABHD15	Q6UXT9	468 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	PLPPR4	Q7Z2D5	763 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	DEFB128	Q7Z7B8	93 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms