RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GRM4Q14833 912 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 CTC1Q2NKJ3 1217 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 TCEAL5Q5H9L2 206 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 XRRA1Q6P2D8 792 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 CYB5R4Q7L1T6 521 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 FCHSD1Q86WN1 690 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 IL17RAQ96F46 866 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 PIGSQ96S52 555 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 SENP7Q9BQF6 1050 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 KCNH6Q9H252 994 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 NSUN3Q9H649 340 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 NRCAMQ92823 1304 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 H3BQ06 376 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 RBAK-RBAKDNI3L0D1 243 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 NOP56O00567 594 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 FIBPO43427 364 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 UPP2O95045 317 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 IGHDP01880 384 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 CHRNA1P02708 482 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 BMPR1AP36894 532 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 LTBRP36941 435 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 TROAPQ12815 778 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 SEMA3FQ13275 785 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 CYFIP1Q7L576 1253 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 IFIH1Q9BYX4 1025 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 LMAN2LQ9H0V9 348 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 DOCK5Q9H7D0 1870 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 EHMT1Q9H9B1 1298 aa11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 ZNF215Q9UL58 517 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-207ENST00000550051 MUC6Q6W4X9 2439 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 ENPP3O14638 875 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 DCXO43602 365 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 LINC00271P0C7V0 271 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 SMARCA1P28370 1054 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 ZP2Q05996 745 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 TRDNQ13061 729 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 PCNX4Q63HM2 1172 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 HOMER1Q86YM7 354 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 ADHFE1Q8IWW8 467 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 GIMAP8Q8ND71 665 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 RTEL1Q9NZ71 1219 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 TTC3P53804 2025 aa11.38□□□□□ -0.59
TRAFD1-207ENST00000550051 MYO7AQ13402 2215 aa11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 PIK3CDO00329 1044 aa11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 CTSHP09668 335 aa11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 ARHGAP4P98171 946 aa11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 TAF2Q6P1X5 1199 aa11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 ALYREFQ86V81 257 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 LMBR1Q8WVP7 490 aa11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 ZNF689Q96CS4 500 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 C11orf84Q9BUA3 381 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-207ENST00000550051 ERICH2A1L162 156 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 GRM6O15303 877 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 CYP21A2P08686 494 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 MGAT3Q09327 533 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 HYAL1Q12794 435 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 SMAD2Q15796 467 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 NLRX1Q86UT6 975 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 CRIPAKQ8N1N5 446 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 IGDCC4Q8TDY8 1250 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 UIMC1Q96RL1 719 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 PLVAPQ9BX97 442 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 IL25Q9H293 177 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 RC3H2Q9HBD1 1191 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 CLDND1Q9NY35 253 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 TELO2Q9Y4R8 837 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 SQORQ9Y6N5 450 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 ATG2AQ2TAZ0 1938 aa11.36□□□□□ -0.59
TRAFD1-207ENST00000550051 PIEZO1Q92508 2521 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 MBLAC1A4D2B0 266 aaPredicted RBP11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 MEIS2O14770 477 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 MAFGO15525 162 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 DGKIO75912 1065 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 RPLP2P05387 115 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 CTNNB1P35222 781 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 IRS1P35568 1242 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 ADAM15Q13444 863 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 LPIN1Q14693 890 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 WTAPQ15007 396 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 SART3Q15020 963 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 NAALADL2Q58DX5 795 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 MARCH8Q5T0T0 291 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 UTP14CQ5TAP6 766 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 FAM43BQ6ZT52 329 aaPredicted RBP11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 EP400NLQ6ZTU2 488 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 CATIPQ7Z7H3 387 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 RSPH3Q86UC2 560 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 TRIM50Q86XT4 487 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms