RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 RNF135Q8IUD6 432 aa14□□□□□ -0.17
TUBA1B-205ENST00000549870 SYTL5Q8TDW5 730 aaPredicted RBP14□□□□□ -0.17
TUBA1B-205ENST00000549870 NSUN6Q8TEA1 469 aaKnown RBP14□□□□□ -0.17
TUBA1B-205ENST00000549870 AFG1LQ8WV93 481 aa14□□□□□ -0.17
TUBA1B-205ENST00000549870 DIAPH3Q9NSV4 1193 aa14□□□□□ -0.17
TUBA1B-205ENST00000549870 COL20A1Q9P218 1284 aa14□□□□□ -0.17
TUBA1B-205ENST00000549870 THEGQ9P2T0 379 aa14□□□□□ -0.17
TUBA1B-205ENST00000549870 TNFRSF10AO00220 468 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 CHMP4BP1P59074 171 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 MRPS5P82675 430 aaKnown RBP13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 BFSP2Q13515 415 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 STXBP2Q15833 593 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 TMEM67Q5HYA8 995 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 ENAHQ8N8S7 591 aaPredicted RBP13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 PHOSPHO2Q8TCD6 241 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 IWS1Q96ST2 819 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 DSCC1Q9BVC3 393 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 C1QTNF2Q9BXJ5 285 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 FTOQ9C0B1 505 aaKnown RBP eCLIP13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 VAT1LQ9HCJ6 419 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 NOD1Q9Y239 953 aa13.99□□□□□ -0.17
TUBA1B-205ENST00000549870 HIP1O00291 1037 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 LZTS3O60299 673 aaPredicted RBP13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 GH1P01241 217 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 PARP1P09874 1014 aaKnown RBP13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 PTGISQ16647 500 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 IMMTQ16891 758 aaKnown RBP13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 QRICH1Q2TAL8 776 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 TRAF7Q6Q0C0 670 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 FBXO11Q86XK2 927 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 DEPDC4Q8N2C3 294 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 PLPP7Q8NBV4 271 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 SLC9A7Q96T83 725 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 RMDN3Q96TC7 470 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 JMJD4Q9H9V9 463 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 CTNNA3Q9UI47 895 aa13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 MRPL11Q9Y3B7 192 aaKnown RBP13.98□□□□□ -0.17
TUBA1B-205ENST00000549870 RNF223E7ERA6 249 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 RFXAPO00287 272 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 DHX16O60231 1041 aaKnown RBP13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 EIF3JO75822 258 aaKnown RBP13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 CA3P07451 260 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 MMP3P08254 477 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 CASTP20810 708 aaKnown RBP13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 SH3BP2P78314 561 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 ARHGAP1Q07960 439 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 MAP7D1Q3KQU3 841 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 GDF6Q6KF10 455 aaPredicted RBP13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 CHST3Q7LGC8 479 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 SESTD1Q86VW0 696 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 KAT2BQ92831 832 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 KRT23Q9C075 422 aa13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 DDX41Q9UJV9 622 aaKnown RBP13.97□□□□□ -0.17
TUBA1B-205ENST00000549870 SPTBN5Q9NRC6 3674 aaKnown RBP13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 SCN10AQ9Y5Y9 1956 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 CARNS1A5YM72 827 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 KIF28PB7ZC32 967 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 CFBP00751 764 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 NR3C2P08235 984 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 NCOA4Q13772 614 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 DGKDQ16760 1214 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 TSGA10IPQ3SY00 556 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 HERC6Q8IVU3 1022 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 MICALL1Q8N3F8 863 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 CAGE1Q8TC20 777 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 RNF166Q96A37 237 aaPredicted RBP13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 UBAC1Q9BSL1 405 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 CERS4Q9HA82 394 aa13.96□□□□□ -0.17
TUBA1B-205ENST00000549870 CHD9Q3L8U1 2897 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 BAIAP3O94812 1187 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 POU3F3P20264 500 aaPredicted RBP13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 GPNMBQ14956 572 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 AGERQ15109 404 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 IFIT1BQ5T764 474 aaKnown RBP13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 CCDC155Q8N6L0 562 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 EXOC6Q8TAG9 804 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 AFAP1L1Q8TED9 768 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 EMID1Q96A84 441 aaPredicted RBP13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 AMNQ9BXJ7 453 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 PXMP2Q9NR77 195 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 ZMIZ1Q9ULJ6 1067 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 MTCH2Q9Y6C9 303 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 MYO9BQ13459 2157 aa13.95□□□□□ -0.18
TUBA1B-205ENST00000549870 EPOPA6NHQ4 379 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 KLRF2D3W0D1 207 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 OPLAHO14841 1288 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 SELPP16109 830 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 HSD17B4P51659 736 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 TAP1Q03518 808 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 LAMC2Q13753 1193 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 SEC23AQ15436 765 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 PLA2G2CQ5R387 149 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
TUBA1B-205ENST00000549870 GBF1Q92538 1859 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms