RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 GCOM1H8Y6P7 765 aaPredicted RBP18.35■□□□□ 0.53
SVOP-202ENST00000548229 OPLAHO14841 1288 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 ZBTB5O15062 677 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 KDM4AO75164 1064 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 POLR2MP0CAP2 368 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 COASYQ13057 564 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 CBX2Q14781 532 aaPredicted RBP18.35■□□□□ 0.53
SVOP-202ENST00000548229 EFHBQ8N7U6 833 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 SMRP1Q8NCR6 262 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 ZNF689Q96CS4 500 aaPredicted RBP18.35■□□□□ 0.53
SVOP-202ENST00000548229 OSBPL7Q9BZF2 842 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 RC3H2Q9HBD1 1191 aaKnown RBP18.35■□□□□ 0.53
SVOP-202ENST00000548229 PLAGL2Q9UPG8 496 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 PTPRZ1P23471 2315 aaPredicted RBP18.35■□□□□ 0.53
SVOP-202ENST00000548229 SPTBN4Q9H254 2564 aa18.35■□□□□ 0.53
SVOP-202ENST00000548229 NEDD4P46934 1319 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 FSD2A1L4K1 749 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 LOC730098B7Z3J9 87 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 ENPP3O14638 875 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 GFRA3O60609 400 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 RPLP2P05387 115 aaKnown RBP18.34■□□□□ 0.53
SVOP-202ENST00000548229 ICAM3P32942 547 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 NUBP1P53384 320 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 SIGLEC14Q08ET2 396 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 TCF15Q12870 199 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 ZNF589Q86UQ0 364 aaPredicted RBP18.34■□□□□ 0.53
SVOP-202ENST00000548229 EHMT1Q9H9B1 1298 aa18.34■□□□□ 0.53
SVOP-202ENST00000548229 DGKIO75912 1065 aa18.33■□□□□ 0.52
SVOP-202ENST00000548229 CHRNA1P02708 482 aa18.33■□□□□ 0.52
SVOP-202ENST00000548229 HOXA13P31271 388 aaPredicted RBP18.33■□□□□ 0.52
SVOP-202ENST00000548229 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.52
SVOP-202ENST00000548229 ADAM17P78536 824 aa18.33■□□□□ 0.52
SVOP-202ENST00000548229 ENAHQ8N8S7 591 aaPredicted RBP18.33■□□□□ 0.52
SVOP-202ENST00000548229 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.52
SVOP-202ENST00000548229 MTMR8Q96EF0 704 aa18.33■□□□□ 0.52
SVOP-202ENST00000548229 GPR20Q99678 358 aa18.33■□□□□ 0.52
SVOP-202ENST00000548229 ALG13Q9NP73 1137 aaKnown RBP18.33■□□□□ 0.52
SVOP-202ENST00000548229 MYO15AQ9UKN7 3530 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 LINC01565O15544 149 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 GHRP10912 638 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 PDE1AP54750 535 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
SVOP-202ENST00000548229 NMIQ13287 307 aaPredicted RBP18.32■□□□□ 0.52
SVOP-202ENST00000548229 ANKRD45Q5TZF3 282 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 CYFIP1Q7L576 1253 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 IL31RAQ8NI17 732 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 UBAC1Q9BSL1 405 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 PHF7Q9BWX1 381 aaPredicted RBP18.32■□□□□ 0.52
SVOP-202ENST00000548229 KRT23Q9C075 422 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 CLEC1BQ9P126 229 aa18.32■□□□□ 0.52
SVOP-202ENST00000548229 SPATA31C2B4DYI2 1134 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 KLRF2D3W0D1 207 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 FIBPO43427 364 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 CAMK1Q14012 370 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 IFIT1BQ5T764 474 aaKnown RBP18.31■□□□□ 0.52
SVOP-202ENST00000548229 FCHSD1Q86WN1 690 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 CMTR2Q8IYT2 770 aaKnown RBP18.31■□□□□ 0.52
SVOP-202ENST00000548229 GIMAP8Q8ND71 665 aaPredicted RBP18.31■□□□□ 0.52
SVOP-202ENST00000548229 INPP4AQ96PE3 977 aaPredicted RBP18.31■□□□□ 0.52
SVOP-202ENST00000548229 SENP7Q9BQF6 1050 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 FTHL17Q9BXU8 183 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 CNNM2Q9H8M5 875 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 ZSWIM5Q9P217 1185 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 TTC3P53804 2025 aa18.31■□□□□ 0.52
SVOP-202ENST00000548229 KAT6AQ92794 2004 aa18.3■□□□□ 0.52
SVOP-202ENST00000548229 B4E1Z4 1266 aa18.3■□□□□ 0.52
SVOP-202ENST00000548229 STAG3L1P0CL83 205 aa18.3■□□□□ 0.52
SVOP-202ENST00000548229 ATF7P17544 494 aaPredicted RBP18.3■□□□□ 0.52
SVOP-202ENST00000548229 LPIN1Q14693 890 aa18.3■□□□□ 0.52
SVOP-202ENST00000548229 UTP14CQ5TAP6 766 aaKnown RBP18.3■□□□□ 0.52
SVOP-202ENST00000548229 TSHZ1Q6ZSZ6 1077 aa18.3■□□□□ 0.52
SVOP-202ENST00000548229 FAM43BQ6ZT52 329 aaPredicted RBP18.3■□□□□ 0.52
SVOP-202ENST00000548229 SPPL3Q8TCT6 385 aa18.3■□□□□ 0.52
SVOP-202ENST00000548229 ATOH1Q92858 354 aaPredicted RBP18.3■□□□□ 0.52
SVOP-202ENST00000548229 GPKOWQ92917 476 aaPredicted RBP eCLIP18.3■□□□□ 0.52
SVOP-202ENST00000548229 SQORQ9Y6N5 450 aa18.3■□□□□ 0.52
SVOP-202ENST00000548229 RIF1Q5UIP0 2472 aaKnown RBP18.29■□□□□ 0.52
SVOP-202ENST00000548229 RBAK-RBAKDNI3L0D1 243 aa18.29■□□□□ 0.52
SVOP-202ENST00000548229 CSPG5O95196 566 aa18.29■□□□□ 0.52
SVOP-202ENST00000548229 ITGB1P05556 798 aa18.29■□□□□ 0.52
SVOP-202ENST00000548229 AVPR2P30518 371 aa18.29■□□□□ 0.52
SVOP-202ENST00000548229 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
SVOP-202ENST00000548229 FBXO47Q5MNV8 452 aa18.29■□□□□ 0.52
SVOP-202ENST00000548229 NPAS4Q8IUM7 802 aa18.29■□□□□ 0.52
SVOP-202ENST00000548229 STAG2Q8N3U4 1231 aa18.29■□□□□ 0.52
SVOP-202ENST00000548229 USP15Q9Y4E8 981 aaPredicted RBP18.29■□□□□ 0.52
SVOP-202ENST00000548229 ATG2AQ2TAZ0 1938 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 PPP1R11O60927 126 aaPredicted RBP18.28■□□□□ 0.52
SVOP-202ENST00000548229 NRIP1P48552 1158 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 MRPS9P82933 396 aaKnown RBP18.28■□□□□ 0.52
SVOP-202ENST00000548229 MGAT3Q09327 533 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 IER5Q5VY09 327 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 XRRA1Q6P2D8 792 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 TRIM50Q86XT4 487 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 KLHL23Q8NBE8 558 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 POF1BQ8WVV4 589 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 BCAS3Q9H6U6 928 aa18.28■□□□□ 0.52
SVOP-202ENST00000548229 TLE6Q9H808 572 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms