RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 TAF6LQ9Y6J9 622 aa26.51■■□□□ 1.83
SMARCD1-204ENST00000547637 TRANK1O15050 2925 aa26.5■■□□□ 1.83
SMARCD1-204ENST00000547637 TCF7P36402 384 aaPredicted RBP26.5■■□□□ 1.83
SMARCD1-204ENST00000547637 SYNE3Q6ZMZ3 975 aa26.5■■□□□ 1.83
SMARCD1-204ENST00000547637 TRIM50Q86XT4 487 aa26.5■■□□□ 1.83
SMARCD1-204ENST00000547637 MRPL38Q96DV4 380 aaKnown RBP26.5■■□□□ 1.83
SMARCD1-204ENST00000547637 SLC12A7Q9Y666 1083 aa26.5■■□□□ 1.83
SMARCD1-204ENST00000547637 RPLP2P05387 115 aaKnown RBP26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 LIFRP42702 1097 aa26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 MKRN4PQ13434 485 aaPredicted RBP26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 EPC2Q52LR7 807 aa26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 TIGD5Q53EQ6 642 aa26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 FAM26DQ5JW98 314 aa26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 LMBR1Q8WVP7 490 aa26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 GLG1Q92896 1179 aa26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 ERAP1Q9NZ08 941 aa26.49■■□□□ 1.83
SMARCD1-204ENST00000547637 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.48■■□□□ 1.83
SMARCD1-204ENST00000547637 PUS10Q3MIT2 529 aaKnown RBP26.48■■□□□ 1.83
SMARCD1-204ENST00000547637 SRBD1Q8N5C6 995 aaKnown RBP26.48■■□□□ 1.83
SMARCD1-204ENST00000547637 SMARCAD1Q9H4L7 1026 aa26.48■■□□□ 1.83
SMARCD1-204ENST00000547637 DOCK5Q9H7D0 1870 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 H3BNC9 293 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 ADAM17P78536 824 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 PPFIA1Q13136 1202 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 GPM6BQ13491 265 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 MTMR1Q13613 665 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 LEXMQ3ZCV2 418 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 RPAINQ86UA6 219 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 TMEM192Q8IY95 271 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 IL17RAQ96F46 866 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 RWDD3Q9Y3V2 267 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 BRWD1Q9NSI6 2320 aa26.47■■□□□ 1.83
SMARCD1-204ENST00000547637 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.46■■□□□ 1.83
SMARCD1-204ENST00000547637 SH2B2O14492 632 aaPredicted RBP26.46■■□□□ 1.83
SMARCD1-204ENST00000547637 PLEKHA8P1O95397 391 aa26.46■■□□□ 1.83
SMARCD1-204ENST00000547637 KCNA5P22460 613 aa26.46■■□□□ 1.83
SMARCD1-204ENST00000547637 FIBCD1Q8N539 461 aa26.46■■□□□ 1.83
SMARCD1-204ENST00000547637 BDP1A6H8Y1 2624 aa26.46■■□□□ 1.83
SMARCD1-204ENST00000547637 TMEM31Q5JXX7 168 aa26.45■■□□□ 1.82
SMARCD1-204ENST00000547637 RNF20Q5VTR2 975 aa26.45■■□□□ 1.82
SMARCD1-204ENST00000547637 FANCBQ8NB91 859 aa26.45■■□□□ 1.82
SMARCD1-204ENST00000547637 BANK1Q8NDB2 785 aa26.45■■□□□ 1.82
SMARCD1-204ENST00000547637 FAM122AQ96E09 287 aa26.45■■□□□ 1.82
SMARCD1-204ENST00000547637 AZI2Q9H6S1 392 aa26.45■■□□□ 1.82
SMARCD1-204ENST00000547637 TUBE1Q9UJT0 475 aa26.45■■□□□ 1.82
SMARCD1-204ENST00000547637 FAM50BQ9Y247 325 aa26.45■■□□□ 1.82
SMARCD1-204ENST00000547637 RRN3P2A6NIE6 340 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 NCK2O43639 380 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 KCNA2P16389 499 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 CMTR1Q8N1G2 835 aaKnown RBP26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 CCDC82Q8N4S0 544 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 EPHX3Q9H6B9 360 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 JADE2Q9NQC1 790 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 PCDHA6Q9UN73 950 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 HCN4Q9Y3Q4 1203 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 PCDHA8Q9Y5H6 950 aa26.44■■□□□ 1.82
SMARCD1-204ENST00000547637 M0QZ92 97 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 SLC27A2O14975 620 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 ATP9AO75110 1047 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 CHRNA1P02708 482 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 RB1P06400 928 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 ITGB5P18084 799 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 RXRAP19793 462 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 GRIK4Q16099 956 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 HEATR3Q7Z4Q2 680 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 TEX2Q8IWB9 1127 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 UBIAD1Q9Y5Z9 338 aa26.43■■□□□ 1.82
SMARCD1-204ENST00000547637 GSTTP1A0A1W2PQM5 241 aa26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 GHRP10912 638 aa26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 MARK3P27448 753 aa26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 IER5Q5VY09 327 aa26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 EP400NLQ6ZTU2 488 aa26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 LSG1Q9H089 658 aaKnown RBP26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 NSUN3Q9H649 340 aaKnown RBP26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 ANO2Q9NQ90 1003 aa26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 RBM28Q9NW13 759 aaKnown RBP26.42■■□□□ 1.82
SMARCD1-204ENST00000547637 UBE2SQ16763 222 aa26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 CREB3L3Q68CJ9 461 aa26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 PTCRAQ6ISU1 281 aaPredicted RBP26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 SDF4Q9BRK5 362 aa26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 ESYT1Q9BSJ8 1104 aa26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 LRFN3Q9BTN0 628 aa26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 C11orf84Q9BUA3 381 aaPredicted RBP26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 JPH1Q9HDC5 661 aaPredicted RBP26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 PKD2L1Q9P0L9 805 aa26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 RAPGEFL1Q9UHV5 662 aa26.41■■□□□ 1.82
SMARCD1-204ENST00000547637 FOSP01100 380 aaPredicted RBP26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 SSTR3P32745 418 aaPredicted RBP26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 CTNNB1P35222 781 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 IRX6P78412 446 aaPredicted RBP26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 RUFY4Q6ZNE9 571 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 TMTC3Q6ZXV5 915 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 MICU3Q86XE3 530 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 FAM178BQ8IXR5 827 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 GJD3Q8N144 294 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 DNAJB3Q8WWF6 145 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 SLC9A2Q9UBY0 812 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 TELO2Q9Y4R8 837 aa26.4■■□□□ 1.82
SMARCD1-204ENST00000547637 XIRP2A4UGR9 3374 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms