RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 PARNO95453 639 aaKnown RBP16.83■□□□□ 0.28
CCDC38-205ENST00000546947 SMIM10L2AP0DMW4 78 aa16.83■□□□□ 0.28
CCDC38-205ENST00000546947 SMIM10L2BP0DMW5 78 aa16.83■□□□□ 0.28
CCDC38-205ENST00000546947 ARP10275 920 aa16.83■□□□□ 0.28
CCDC38-205ENST00000546947 HOXC8P31273 242 aa16.83■□□□□ 0.28
CCDC38-205ENST00000546947 DHX38Q92620 1227 aaKnown RBP16.83■□□□□ 0.28
CCDC38-205ENST00000546947 AGO4Q9HCK5 861 aaKnown RBP16.83■□□□□ 0.28
CCDC38-205ENST00000546947 JPH1Q9HDC5 661 aaPredicted RBP16.83■□□□□ 0.28
CCDC38-205ENST00000546947 TELO2Q9Y4R8 837 aa16.83■□□□□ 0.28
CCDC38-205ENST00000546947 STK36Q9NRP7 1315 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 GNAT1P11488 350 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 SELPP16109 830 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
CCDC38-205ENST00000546947 C8orf34Q49A92 452 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 GALNT17Q6IS24 598 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 PLA2G4DQ86XP0 818 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 TRIM50Q86XT4 487 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 DEFB123Q8N688 67 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 RASGRP4Q8TDF6 673 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 C22orf23Q9BZE7 217 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 PCDHA4Q9UN74 947 aa16.82■□□□□ 0.28
CCDC38-205ENST00000546947 EMSYQ7Z589 1322 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 IGLV3-22A0A075B6J6 115 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 FAM86B1E9PN63 330 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 FAM86B2P0C5J1 330 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 CKBP12277 381 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 CIITAP33076 1130 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 NEK4P51957 841 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 ZNF200P98182 395 aaPredicted RBP16.81■□□□□ 0.28
CCDC38-205ENST00000546947 HIC1Q14526 733 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 TRIM71Q2Q1W2 868 aaKnown RBP16.81■□□□□ 0.28
CCDC38-205ENST00000546947 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 LRRC8DQ7L1W4 858 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 OTOP2Q7RTS6 562 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 DEFB128Q7Z7B8 93 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 SERINC5Q86VE9 423 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 DAGLBQ8NCG7 672 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 ATP6V0A1Q93050 837 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 VWCEQ96DN2 955 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 RNPEPQ9H4A4 650 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 SMARCAD1Q9H4L7 1026 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 ERAP1Q9NZ08 941 aa16.81■□□□□ 0.28
CCDC38-205ENST00000546947 GBF1Q92538 1859 aa16.8■□□□□ 0.28
CCDC38-205ENST00000546947 NRCAMQ92823 1304 aa16.8■□□□□ 0.28
CCDC38-205ENST00000546947 LGR5O75473 907 aa16.8■□□□□ 0.28
CCDC38-205ENST00000546947 ACTN1P12814 892 aa16.8■□□□□ 0.28
CCDC38-205ENST00000546947 XBP1P17861 261 aa16.8■□□□□ 0.28
CCDC38-205ENST00000546947 ITGB3BPQ13352 177 aaPredicted RBP16.8■□□□□ 0.28
CCDC38-205ENST00000546947 Q7L0L9 218 aa16.8■□□□□ 0.28
CCDC38-205ENST00000546947 BLIDQ8IZY5 108 aa16.8■□□□□ 0.28
CCDC38-205ENST00000546947 TET1Q8NFU7 2136 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 TMEM265A0A087WTH1 108 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 TREHO43280 583 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 ATG7O95352 703 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 USP11P51784 963 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 ACTR2P61160 394 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 ADAM17P78536 824 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 ME3Q16798 604 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 WASF1Q92558 559 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 GLG1Q92896 1179 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 TNPO1Q92973 898 aaKnown RBP16.79■□□□□ 0.28
CCDC38-205ENST00000546947 GTF3C6Q969F1 213 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 AIFM3Q96NN9 605 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 FTOQ9C0B1 505 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC38-205ENST00000546947 AZI2Q9H6S1 392 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 MTMR10Q9NXD2 777 aa16.79■□□□□ 0.28
CCDC38-205ENST00000546947 CXXC1Q9P0U4 656 aaPredicted RBP16.79■□□□□ 0.28
CCDC38-205ENST00000546947 M0R2N6 131 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 IPO5O00410 1097 aaKnown RBP16.78■□□□□ 0.28
CCDC38-205ENST00000546947 CAND2O75155 1236 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 CTDNEP1O95476 244 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 NPY5RQ15761 445 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 ZNF618Q5T7W0 954 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 PLPPR4Q7Z2D5 763 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 WNT8BQ93098 351 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 PCYT2Q99447 389 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 ZNF577Q9BSK1 485 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 PHF20Q9BVI0 1012 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 TBC1D22BQ9NU19 505 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 SETD4Q9NVD3 440 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 MYH9P35579 1960 aaKnown RBP16.78■□□□□ 0.28
CCDC38-205ENST00000546947 WDR81Q562E7 1941 aa16.78■□□□□ 0.28
CCDC38-205ENST00000546947 ZBBXA8MT70 800 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 DHX15O43143 795 aaKnown RBP16.77■□□□□ 0.28
CCDC38-205ENST00000546947 BAIAP3O94812 1187 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 LARGE1O95461 756 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 CXCL10P02778 98 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 DNAJB2P25686 324 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 MARK3P27448 753 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 PPFIA1Q13136 1202 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 GPNMBQ14956 572 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 PRR16Q569H4 304 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 TRAF7Q6Q0C0 670 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 NECAB1Q8N987 351 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 LMBR1Q8WVP7 490 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 ORC3Q9UBD5 711 aaPredicted RBP16.77■□□□□ 0.28
CCDC38-205ENST00000546947 SLC4A7Q9Y6M7 1214 aa16.77■□□□□ 0.28
CCDC38-205ENST00000546947 IGKV6D-21A0A0A0MT36 114 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms