RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 NFIXQ14938 502 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 FAM26FQ5R3K3 315 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 PRAMEF18Q5VWM3 479 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 TMC5Q6UXY8 1006 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 SH3RF2Q8TEC5 729 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 SRPK3Q9UPE1 567 aa8.54□□□□□ -1.04
CPNE8-204ENST00000546603 DDX3XO00571 662 aaKnown RBP eCLIP8.53□□□□□ -1.04
CPNE8-204ENST00000546603 ENO2P09104 434 aaPredicted RBP8.53□□□□□ -1.04
CPNE8-204ENST00000546603 LCE4AQ5TA78 99 aa8.53□□□□□ -1.04
CPNE8-204ENST00000546603 OSTM1Q86WC4 334 aa8.53□□□□□ -1.04
CPNE8-204ENST00000546603 RELTQ969Z4 430 aa8.53□□□□□ -1.04
CPNE8-204ENST00000546603 TEPSINQ96N21 525 aa8.53□□□□□ -1.04
CPNE8-204ENST00000546603 CD244Q9BZW8 370 aa8.53□□□□□ -1.04
CPNE8-204ENST00000546603 NCOA5Q9HCD5 579 aaKnown RBP8.53□□□□□ -1.04
CPNE8-204ENST00000546603 DLL4Q9NR61 685 aa8.53□□□□□ -1.04
CPNE8-204ENST00000546603 CBLCQ9ULV8 474 aa8.53□□□□□ -1.04
CPNE8-204ENST00000546603 WASF3Q9UPY6 502 aa8.53□□□□□ -1.04
CPNE8-204ENST00000546603 CCDC66A2RUB6 948 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 PLD2O14939 933 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 DNM2P50570 870 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 LACTBP83111 547 aaPredicted RBP8.52□□□□□ -1.05
CPNE8-204ENST00000546603 KIAA2012Q0VF49 1180 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 RGL3Q3MIN7 710 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 BTBD8Q5XKL5 378 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 PROSER1Q86XN7 944 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 ZSWIM3Q96MP5 696 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 CROTQ9UKG9 612 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 ATP23Q9Y6H3 246 aa8.52□□□□□ -1.05
CPNE8-204ENST00000546603 ZNF28P17035 718 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 KRT15P19012 456 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 IL13P35225 146 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 FIGNQ5HY92 759 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 MCTP2Q6DN12 878 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 FAM124AQ86V42 546 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 PTRH1Q86Y79 214 aaKnown RBP8.51□□□□□ -1.05
CPNE8-204ENST00000546603 DTX3Q8N9I9 347 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 SCLYQ96I15 445 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 L2HGDHQ9H9P8 463 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 RBPJLQ9UBG7 517 aa8.51□□□□□ -1.05
CPNE8-204ENST00000546603 ZNF561-AS1K7EIQ3 104 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 ACOT7O00154 380 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 MAN2B1O00754 1011 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 RASGRP1O95267 797 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 NPTXRO95502 500 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 AMY2AP04746 511 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 CKMP06732 381 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 PTPN1P18031 435 aaKnown RBP8.5□□□□□ -1.05
CPNE8-204ENST00000546603 AMY2BP19961 511 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 GJA4P35212 333 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 JAM2P57087 298 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 SQSTM1Q13501 440 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 ZFYVE27Q5T4F4 411 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 ERICH6BQ5W0A0 696 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 CD276Q5ZPR3 534 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 BRAPQ7Z569 592 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 TXNDC5Q8NBS9 432 aaKnown RBP8.5□□□□□ -1.05
CPNE8-204ENST00000546603 SH3TC2Q8TF17 1288 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 CELF4Q9BZC1 486 aaKnown RBP8.5□□□□□ -1.05
CPNE8-204ENST00000546603 RIC8BQ9NVN3 520 aa8.5□□□□□ -1.05
CPNE8-204ENST00000546603 TCRBV16S1A1N1A0A5B0 115 aa8.49□□□□□ -1.05
CPNE8-204ENST00000546603 MROH6A6NGR9 719 aa8.49□□□□□ -1.05
CPNE8-204ENST00000546603 C9orf118A6NHY6 69 aa8.49□□□□□ -1.05
CPNE8-204ENST00000546603 MLLT6P55198 1093 aaPredicted RBP8.49□□□□□ -1.05
CPNE8-204ENST00000546603 PFKPQ01813 784 aa8.49□□□□□ -1.05
CPNE8-204ENST00000546603 RTP5Q14D33 572 aa8.49□□□□□ -1.05
CPNE8-204ENST00000546603 FNDC3BQ53EP0 1204 aaKnown RBP8.49□□□□□ -1.05
CPNE8-204ENST00000546603 CXorf38Q8TB03 319 aa8.49□□□□□ -1.05
CPNE8-204ENST00000546603 LCORQ96JN0 433 aaPredicted RBP8.49□□□□□ -1.05
CPNE8-204ENST00000546603 ADAM7Q9H2U9 754 aa8.49□□□□□ -1.05
CPNE8-204ENST00000546603 TRIM39Q9HCM9 518 aa8.49□□□□□ -1.05
CPNE8-204ENST00000546603 FAM90A27PA6NNH2 459 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 CLASP2O75122 1294 aaKnown RBP8.48□□□□□ -1.05
CPNE8-204ENST00000546603 FBXO21O94952 628 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 CYP1A1P04798 512 aaPredicted RBP8.48□□□□□ -1.05
CPNE8-204ENST00000546603 CHGBP05060 677 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 SKIDA1Q1XH10 827 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 IGDCC4Q8TDY8 1250 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 TMEM168Q9H0V1 697 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 SMURF1Q9HCE7 757 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 ARHGAP20Q9P2F6 1191 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 FTSJ1Q9UET6 329 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 COQ6Q9Y2Z9 468 aa8.48□□□□□ -1.05
CPNE8-204ENST00000546603 ZNF839A8K0R7 811 aa8.47□□□□□ -1.05
CPNE8-204ENST00000546603 FOXD2O60548 495 aaPredicted RBP8.47□□□□□ -1.05
CPNE8-204ENST00000546603 RAPGEF3O95398 923 aa8.47□□□□□ -1.05
CPNE8-204ENST00000546603 DBPQ10586 325 aaPredicted RBP8.47□□□□□ -1.05
CPNE8-204ENST00000546603 UBXN11Q5T124 520 aa8.47□□□□□ -1.05
CPNE8-204ENST00000546603 LCE1DQ5T752 114 aa8.47□□□□□ -1.05
CPNE8-204ENST00000546603 TRMT10BQ6PF06 316 aaKnown RBP8.47□□□□□ -1.05
CPNE8-204ENST00000546603 BORAQ6PGQ7 559 aa8.47□□□□□ -1.05
CPNE8-204ENST00000546603 HHIPL2Q6UWX4 724 aa8.47□□□□□ -1.05
CPNE8-204ENST00000546603 FGD2Q7Z6J4 655 aa8.47□□□□□ -1.05
CPNE8-204ENST00000546603 DDX1Q92499 740 aaKnown RBP8.47□□□□□ -1.05
CPNE8-204ENST00000546603 YTHDC1Q96MU7 727 aaKnown RBP8.47□□□□□ -1.05
CPNE8-204ENST00000546603 PIF1Q9H611 641 aa8.47□□□□□ -1.05
CPNE8-204ENST00000546603 B4E1Z4 1266 aa8.46□□□□□ -1.06
CPNE8-204ENST00000546603 SYN1P17600 705 aa8.46□□□□□ -1.06
CPNE8-204ENST00000546603 CISD2Q8N5K1 135 aaKnown RBP8.46□□□□□ -1.06
CPNE8-204ENST00000546603 ZCCHC14Q8WYQ9 949 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms