RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 BUB1O43683 1085 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 TDP2O95551 362 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 PRELPP51888 382 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 BANK1Q8NDB2 785 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 FAM167AQ96KS9 214 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 WDR70Q9NW82 654 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 E9PMD0 336 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 MYL3P08590 195 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 RPS12P25398 132 aaKnown RBP12.91□□□□□ -0.34
CHERP-203ENST00000546361 QARSP47897 775 aaKnown RBP12.91□□□□□ -0.34
CHERP-203ENST00000546361 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 PADI6Q6TGC4 694 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 ZNF609O15014 1411 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 ZNF233A6NK53 670 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 KCNK3O14649 394 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 LMNB1P20700 586 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 RASA1P20936 1047 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 HOXD10P28358 340 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 MAPK6Q16659 721 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 BSPRYQ5W0U4 402 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 MMP19Q99542 508 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 GABBR1Q9UBS5 961 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 GDAQ9Y2T3 454 aa12.91□□□□□ -0.34
CHERP-203ENST00000546361 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 POTECB2RU33 542 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 C19orf81C9J6K1 198 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 CASP1P29466 404 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 PTPN21Q16825 1174 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 CEP55Q53EZ4 464 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 CASC4Q6P4E1 433 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 TXNRD3Q86VQ6 643 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 IFT20Q8IY31 132 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 IGDCC4Q8TDY8 1250 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 SYNJ2BP-COX16A0A087WUM0 186 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
CHERP-203ENST00000546361 ATP2C2O75185 946 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 CSPG5O95196 566 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 P4HBP07237 508 aaKnown RBP12.9□□□□□ -0.34
CHERP-203ENST00000546361 LONRF2Q1L5Z9 754 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 MAIP1Q8WWC4 291 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 PSPC1Q8WXF1 523 aaKnown RBP12.9□□□□□ -0.34
CHERP-203ENST00000546361 COX16Q9P0S2 106 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 BZW2Q9Y6E2 419 aaKnown RBP12.9□□□□□ -0.34
CHERP-203ENST00000546361 GUCY1A2P33402 732 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 ZNF157P51786 506 aaPredicted RBP12.9□□□□□ -0.34
CHERP-203ENST00000546361 HUNKP57058 714 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 HDLBPQ00341 1268 aaKnown RBP12.9□□□□□ -0.34
CHERP-203ENST00000546361 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.34
CHERP-203ENST00000546361 TRIM50Q86XT4 487 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 CCDC89Q8N998 374 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 TCP11Q8WWU5 503 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.34
CHERP-203ENST00000546361 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
CHERP-203ENST00000546361 USP32Q8NFA0 1604 aa12.9□□□□□ -0.35
CHERP-203ENST00000546361 ARHGAP23Q9P227 1491 aa12.9□□□□□ -0.35
CHERP-203ENST00000546361 STAM2O75886 525 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 GNAT1P11488 350 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 USP11P51784 963 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 KRT81Q14533 505 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 DYDC2Q96IM9 177 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 SNX25Q9H3E2 840 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
CHERP-203ENST00000546361 EPB41L4AQ9HCS5 686 aaPredicted RBP12.89□□□□□ -0.35
CHERP-203ENST00000546361 CLDN3O15551 220 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 ETF1P62495 437 aaKnown RBP12.89□□□□□ -0.35
CHERP-203ENST00000546361 LRRC63Q05C16 580 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 ALCAMQ13740 583 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 PLEKHA4Q9H4M7 779 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 SLIT1O75093 1534 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 C3P01024 1663 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 SFNP31947 248 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 VPS41P49754 854 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 PPP4CP60510 307 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 C16orf86Q6ZW13 317 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 UNC13DQ70J99 1090 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 METTL23Q86XA0 190 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
CHERP-203ENST00000546361 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.89□□□□□ -0.35
CHERP-203ENST00000546361 PRDM10Q9NQV6 1147 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 PPP2R2CQ9Y2T4 447 aa12.89□□□□□ -0.35
CHERP-203ENST00000546361 COPB2P35606 906 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 CUL4BQ13620 913 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 SND1Q7KZF4 910 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHERP-203ENST00000546361 GABPB2Q8TAK5 448 aaPredicted RBP12.88□□□□□ -0.35
CHERP-203ENST00000546361 RAB20Q9NX57 234 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 GCNT4Q9P109 453 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 PRR12Q9ULL5 1215 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 PP2D1A8MPX8 630 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 POTEIP0CG38 1075 aa12.88□□□□□ -0.35
CHERP-203ENST00000546361 CD58P19256 250 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms