RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 ZHX1Q9UKY1 873 aaPredicted RBP11.67□□□□□ -0.54
LINC00939-203ENST00000545784 CCL5P13501 91 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 KCNJ6P48051 423 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 TOB1P50616 345 aaPredicted RBP11.67□□□□□ -0.54
LINC00939-203ENST00000545784 TPM4P67936 248 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 FAM193AP78312 1265 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 ZRSR1Q15695 479 aaKnown RBP11.67□□□□□ -0.54
LINC00939-203ENST00000545784 NYAP1Q6ZVC0 841 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 NIPA1Q7RTP0 329 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 HMX1Q9NP08 348 aaPredicted RBP11.67□□□□□ -0.54
LINC00939-203ENST00000545784 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
LINC00939-203ENST00000545784 FAM184BQ9ULE4 1060 aa11.67□□□□□ -0.54
LINC00939-203ENST00000545784 GNEQ9Y223 722 aaKnown RBP11.67□□□□□ -0.54
LINC00939-203ENST00000545784 A0A1W2PQ27 194 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 A0A1W2PQ64 194 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 A0A1W2PQD8 194 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 ARP10275 920 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 SKILP12757 684 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 Q4G0T1 1027 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 DUSP28Q4G0W2 176 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 PPP4R3AQ6IN85 833 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 MOXD1Q6UVY6 613 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 KIF18AQ8NI77 898 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 SCFD2Q8WU76 684 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 GPRASP2Q96D09 838 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00939-203ENST00000545784 BCAS3Q9H6U6 928 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 ATP9AO75110 1047 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 TDP2O95551 362 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 TGFB3P10600 412 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 AKR1A1P14550 325 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 TNFAIP2Q03169 654 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 LY6KQ17RY6 165 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 NLRX1Q86UT6 975 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 CCDC150Q8NCX0 1101 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 ZNF397Q8NF99 534 aaPredicted RBP11.66□□□□□ -0.54
LINC00939-203ENST00000545784 ENGASEQ8NFI3 743 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 KCNH7Q9NS40 1196 aa11.66□□□□□ -0.54
LINC00939-203ENST00000545784 DDX20Q9UHI6 824 aaKnown RBP11.66□□□□□ -0.54
LINC00939-203ENST00000545784 MCM3APO60318 1980 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 BRCA2P51587 3418 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 MAFGO15525 162 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 CCP110O43303 1012 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 MYCP01106 439 aaPredicted RBP11.65□□□□□ -0.54
LINC00939-203ENST00000545784 NKX3-2P78367 333 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 SNW1Q13573 536 aaKnown RBP11.65□□□□□ -0.54
LINC00939-203ENST00000545784 TTLL4Q14679 1199 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 LETM2Q2VYF4 491 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 GJC2Q5T442 439 aaPredicted RBP11.65□□□□□ -0.54
LINC00939-203ENST00000545784 ADALQ6DHV7 355 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 CREBRFQ8IUR6 639 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
LINC00939-203ENST00000545784 COPS5Q92905 334 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 LENG1Q96BZ8 264 aaPredicted RBP11.65□□□□□ -0.54
LINC00939-203ENST00000545784 SENP7Q9BQF6 1050 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 AGO4Q9HCK5 861 aaKnown RBP11.65□□□□□ -0.54
LINC00939-203ENST00000545784 LRRC37A2A6NM11 1700 aa11.65□□□□□ -0.54
LINC00939-203ENST00000545784 DHX15O43143 795 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 SLC37A4O43826 429 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 DUSP11O75319 330 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 TXNP10599 105 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 KCNA2P16389 499 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 CNGA1P29973 690 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 ZNF76P36508 570 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 ME1P48163 572 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 TRAPPC10P48553 1259 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 MTMR1Q13613 665 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 GNL2Q13823 731 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 GNPTABQ3T906 1256 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 PRR16Q569H4 304 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 KCNV1Q6PIU1 500 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 C11orf57Q6ZUT1 292 aaPredicted RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 Q9Y3F1 56 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 MSH4O15457 936 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 CCNT1O60563 726 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 YEATS4O95619 227 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 GJB1P08034 283 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 GCFC2P16383 781 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 UBA1P22314 1058 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 ITGB3BPQ13352 177 aaPredicted RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 ANO1Q5XXA6 986 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 BRAPQ7Z569 592 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 DHX40Q8IX18 779 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 C4orf32Q8N8J7 132 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 ETNPPLQ8TBG4 499 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 CDHR1Q96JP9 859 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 USP28Q96RU2 1077 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 CRISPLD2Q9H0B8 497 aa11.64□□□□□ -0.55
LINC00939-203ENST00000545784 UPF3AQ9H1J1 476 aaKnown RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 MORC2Q9Y6X9 1032 aaPredicted RBP11.64□□□□□ -0.55
LINC00939-203ENST00000545784 NKRFO15226 690 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00939-203ENST00000545784 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
LINC00939-203ENST00000545784 CCZ1BP86790 482 aa11.63□□□□□ -0.55
LINC00939-203ENST00000545784 CCZ1P86791 482 aaPredicted RBP11.63□□□□□ -0.55
LINC00939-203ENST00000545784 ARHGAP1Q07960 439 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms