RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SPATA31C2B4DYI2 1134 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 M0R296 226 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 ZNF213O14771 459 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 ZBTB5O15062 677 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 STAM2O75886 525 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 DGKIO75912 1065 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 CTSHP09668 335 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 GTF2F1P35269 517 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■■■ 29.2
RTN3-214ENST00000545432 ZXDAP98168 799 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 CLEC1BQ9P126 229 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 NLRC5Q86WI3 1866 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 ATG2AQ2TAZ0 1938 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
RTN3-214ENST00000545432 LINC01565O15544 149 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 CCND2P30279 289 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 MRPS9P82933 396 aaKnown RBP17.1■□□□□ 0.33
RTN3-214ENST00000545432 NEDD9Q14511 834 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 SLC35G1Q2M3R5 365 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 EFHBQ8N7U6 833 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 PBXIP1Q96AQ6 731 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 SENP7Q9BQF6 1050 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 PCDHA1Q9Y5I3 950 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 NRCAMQ92823 1304 aa17.1■□□□□ 0.33
RTN3-214ENST00000545432 USP34Q70CQ2 3546 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 C5orf42Q9H799 3197 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 KLRF2D3W0D1 207 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 SORBS3O60504 671 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 DNAJB1P25685 340 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 HOXA13P31271 388 aaPredicted RBP17.09■□□□□ 0.33
RTN3-214ENST00000545432 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
RTN3-214ENST00000545432 LPIN1Q14693 890 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 CLUL1Q15846 466 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 RIOX1Q9H6W3 641 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 MAD2L2Q9UI95 211 aa17.09■□□□□ 0.33
RTN3-214ENST00000545432 PTPRZ1P23471 2315 aaPredicted RBP17.09■□□□□ 0.33
RTN3-214ENST00000545432 GCOM1H8Y6P7 765 aaPredicted RBP17.08■□□□□ 0.32
RTN3-214ENST00000545432 POLR2MP0CAP2 368 aa17.08■□□□□ 0.32
RTN3-214ENST00000545432 RRP1P56182 461 aaKnown RBP17.08■□□□□ 0.32
RTN3-214ENST00000545432 TRAF1Q13077 416 aa17.08■□□□□ 0.32
RTN3-214ENST00000545432 SEC23AQ15436 765 aa17.08■□□□□ 0.32
RTN3-214ENST00000545432 ANKRD45Q5TZF3 282 aa17.08■□□□□ 0.32
RTN3-214ENST00000545432 TAF2Q6P1X5 1199 aa17.08■□□□□ 0.32
RTN3-214ENST00000545432 FBXL6Q8N531 539 aa17.08■□□□□ 0.32
RTN3-214ENST00000545432 SQORQ9Y6N5 450 aa17.08■□□□□ 0.32
RTN3-214ENST00000545432 MBLAC1A4D2B0 266 aaPredicted RBP17.07■□□□□ 0.32
RTN3-214ENST00000545432 B4E1Z4 1266 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 ITGB1P05556 798 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 GHRP10912 638 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 SDSP20132 328 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 BTG3Q14201 252 aaPredicted RBP17.07■□□□□ 0.32
RTN3-214ENST00000545432 GNPTABQ3T906 1256 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 FBXO47Q5MNV8 452 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 CYFIP1Q7L576 1253 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
RTN3-214ENST00000545432 CMTR2Q8IYT2 770 aaKnown RBP17.07■□□□□ 0.32
RTN3-214ENST00000545432 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
RTN3-214ENST00000545432 ZNF215Q9UL58 517 aaPredicted RBP17.07■□□□□ 0.32
RTN3-214ENST00000545432 TELO2Q9Y4R8 837 aa17.07■□□□□ 0.32
RTN3-214ENST00000545432 NOP56O00567 594 aaKnown RBP17.06■□□□□ 0.32
RTN3-214ENST00000545432 FIBPO43427 364 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
RTN3-214ENST00000545432 GLP2RO95838 553 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 ATF7P17544 494 aaPredicted RBP17.06■□□□□ 0.32
RTN3-214ENST00000545432 NUBP1P53384 320 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 ARHGAP4P98171 946 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 SIGLEC14Q08ET2 396 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 TRIM50Q86XT4 487 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 LINC01599Q8WXQ3 324 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 SUSD6Q92537 303 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 PPP2R3CQ969Q6 453 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 PHF7Q9BWX1 381 aaPredicted RBP17.06■□□□□ 0.32
RTN3-214ENST00000545432 IGFLR1Q9H665 355 aa17.06■□□□□ 0.32
RTN3-214ENST00000545432 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 NDUFV1P49821 464 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 FOXK2Q01167 660 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 MARCH8Q5T0T0 291 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 XRRA1Q6P2D8 792 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 RUFY4Q6ZNE9 571 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 TSHZ1Q6ZSZ6 1077 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 FAM43BQ6ZT52 329 aaPredicted RBP17.05■□□□□ 0.32
RTN3-214ENST00000545432 ADGRD2Q7Z7M1 963 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 ATP8B4Q8TF62 1192 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 KRT23Q9C075 422 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 IRF2BPLQ9H1B7 796 aa17.05■□□□□ 0.32
RTN3-214ENST00000545432 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
RTN3-214ENST00000545432 MRPL42Q9Y6G3 142 aaKnown RBP17.05■□□□□ 0.32
RTN3-214ENST00000545432 ZFHX2Q9C0A1 2572 aaPredicted RBP17.04■□□□□ 0.32
RTN3-214ENST00000545432 MYH6P13533 1939 aa17.04■□□□□ 0.32
RTN3-214ENST00000545432 PROB1E7EW31 1015 aa17.04■□□□□ 0.32
RTN3-214ENST00000545432 CYTH3O43739 400 aa17.04■□□□□ 0.32
RTN3-214ENST00000545432 HDAC1Q13547 482 aaPredicted RBP17.04■□□□□ 0.32
RTN3-214ENST00000545432 FCHSD1Q86WN1 690 aa17.04■□□□□ 0.32
RTN3-214ENST00000545432 SUGP1Q8IWZ8 645 aaKnown RBP17.04■□□□□ 0.32
RTN3-214ENST00000545432 AGO3Q9H9G7 860 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms