RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.6□□□□□ -1.51
UBE4A-203ENST00000545354 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
UBE4A-203ENST00000545354 HNRNPLLQ8WVV9 542 aaKnown RBP5.6□□□□□ -1.51
UBE4A-203ENST00000545354 KIFAP3Q92845 792 aa5.6□□□□□ -1.51
UBE4A-203ENST00000545354 COQ7Q99807 217 aa5.6□□□□□ -1.51
UBE4A-203ENST00000545354 ISCA1Q9BUE6 129 aa5.6□□□□□ -1.51
UBE4A-203ENST00000545354 L2HGDHQ9H9P8 463 aa5.6□□□□□ -1.51
UBE4A-203ENST00000545354 UBN1Q9NPG3 1134 aa5.6□□□□□ -1.51
UBE4A-203ENST00000545354 RTEL1Q9NZ71 1219 aa5.6□□□□□ -1.51
UBE4A-203ENST00000545354 MYO1AQ9UBC5 1043 aa5.6□□□□□ -1.51
UBE4A-203ENST00000545354 ZNF215Q9UL58 517 aaPredicted RBP5.6□□□□□ -1.51
UBE4A-203ENST00000545354 TMEM5Q9Y2B1 443 aa5.6□□□□□ -1.51
UBE4A-203ENST00000545354 RRP7AQ9Y3A4 280 aaKnown RBP5.6□□□□□ -1.51
UBE4A-203ENST00000545354 WDR91A4D1P6 747 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 LRRC72A6NJI9 287 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 LACTBL1A8MY62 500 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 TRDMT1O14717 391 aaKnown RBP5.59□□□□□ -1.51
UBE4A-203ENST00000545354 RASSF9O75901 435 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 TOMM70O94826 608 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 APBB3O95704 486 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 ABL1P00519 1130 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 KRT6AP02538 564 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 KRT6BP04259 564 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 ZSCAN22P10073 491 aaPredicted RBP5.59□□□□□ -1.51
UBE4A-203ENST00000545354 SRGNP10124 158 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 GBP1P32455 592 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 RPL9P32969 192 aaKnown RBP5.59□□□□□ -1.51
UBE4A-203ENST00000545354 ETV1P50549 477 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 RCAN1P53805 252 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 MXRA7P84157 204 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 CAP1Q01518 475 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 TMEM62Q0P6H9 643 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 PPFIA1Q13136 1202 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 DNAJC3Q13217 504 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 ITGB3BPQ13352 177 aaPredicted RBP5.59□□□□□ -1.51
UBE4A-203ENST00000545354 STK38Q15208 465 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 GEN1Q17RS7 908 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 FBXO43Q4G163 708 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 KLC3Q6P597 504 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 SH3BP5LQ7L8J4 393 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 RHOT2Q8IXI1 618 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 NPLOC4Q8TAT6 608 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 ZNF606Q8WXB4 792 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 E2F7Q96AV8 911 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 CNDP2Q96KP4 475 aaKnown RBP5.59□□□□□ -1.51
UBE4A-203ENST00000545354 TSGA13Q96PP4 275 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 NAT10Q9H0A0 1025 aaKnown RBP5.59□□□□□ -1.51
UBE4A-203ENST00000545354 ACAD9Q9H845 621 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 PARP2Q9UGN5 583 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.51
UBE4A-203ENST00000545354 LAMP5Q9UJQ1 280 aa5.59□□□□□ -1.51
UBE4A-203ENST00000545354 GPR75-ASB3A0A0A6YYF3 556 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 NUTM2FA1L443 756 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CCDC169A6NNP5 214 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PI4K2BG5E9Z4 385 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PLOD2O00469 737 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 SEMA3EO15041 775 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 ADCY5O95622 1261 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CYP17A1P05093 508 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PTPN2P17706 415 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 RXRAP19793 462 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 ANXA13P27216 316 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CBX5P45973 191 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 NR2C2P49116 596 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 S100A12P80511 92 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 ATP2B2Q01814 1243 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PPP2R5CQ13362 524 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CMPK2Q5EBM0 449 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 DEPDC1Q5TB30 811 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 TRIM68Q6AZZ1 485 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 ZNF600Q6ZNG1 722 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 TRIM50Q86XT4 487 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PALM2Q8IXS6 379 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 STKLD1Q8NE28 680 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PI4K2BQ8TCG2 481 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CNKSR1Q969H4 720 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 EFHD2Q96C19 240 aaPredicted RBP5.59□□□□□ -1.52
UBE4A-203ENST00000545354 INTS12Q96CB8 462 aaKnown RBP5.59□□□□□ -1.52
UBE4A-203ENST00000545354 TMX3Q96JJ7 454 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 TNIP3Q96KP6 325 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 FNBP1Q96RU3 617 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 INTS2Q9H0H0 1204 aaKnown RBP5.59□□□□□ -1.52
UBE4A-203ENST00000545354 OSBPL2Q9H1P3 480 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PREBQ9HCU5 417 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CNGB3Q9NQW8 809 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 C8orf4Q9NR00 106 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 RMND1Q9NWS8 449 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PDP2Q9P2J9 529 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CTNNAL1Q9UBT7 734 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PFDN2Q9UHV9 154 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 KIAA1257Q9ULG3 409 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 RIMKLBQ9ULI2 386 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 ADAMTS8Q9UP79 889 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CAB39Q9Y376 341 aaPredicted RBP5.59□□□□□ -1.52
UBE4A-203ENST00000545354 ASB3Q9Y575 518 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 MAGED1Q9Y5V3 778 aaPredicted RBP5.59□□□□□ -1.52
UBE4A-203ENST00000545354 MRPL42Q9Y6G3 142 aaKnown RBP5.59□□□□□ -1.52
UBE4A-203ENST00000545354 CCDC7Q96M83 1385 aa5.59□□□□□ -1.52
UBE4A-203ENST00000545354 PTPRMP28827 1452 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms