RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MRPL11Q9Y3B7 192 aaKnown RBP10.96□□□□□ -0.65
CHD4-212ENST00000545083 TELO2Q9Y4R8 837 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 PCDHGC5Q9Y5F6 944 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 NEDD4P46934 1319 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 A0A0D9SFI3 127 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 ENPP3O14638 875 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 RBM10P98175 930 aaKnown RBP10.95□□□□□ -0.66
CHD4-212ENST00000545083 GHRHRQ02643 423 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 BTG3Q14201 252 aaPredicted RBP10.95□□□□□ -0.66
CHD4-212ENST00000545083 PGM5Q15124 567 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 STOX1Q6ZVD7 989 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 RBM23Q86U06 439 aaKnown RBP10.95□□□□□ -0.66
CHD4-212ENST00000545083 ZNF589Q86UQ0 364 aaPredicted RBP10.95□□□□□ -0.66
CHD4-212ENST00000545083 TRIM50Q86XT4 487 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 SPPL3Q8TCT6 385 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 LMBR1Q8WVP7 490 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 LINC01599Q8WXQ3 324 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 RPGRIP1Q96KN7 1286 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 FAM227BQ96M60 508 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 EHMT1Q9H9B1 1298 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 MLXIPQ9HAP2 919 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 VAT1LQ9HCJ6 419 aa10.95□□□□□ -0.66
CHD4-212ENST00000545083 MRPL42Q9Y6G3 142 aaKnown RBP10.95□□□□□ -0.66
CHD4-212ENST00000545083 VPS13AQ96RL7 3174 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 CCDC171Q6TFL3 1326 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 SALL3Q9BXA9 1300 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 PROB1E7EW31 1015 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 PPP1R11O60927 126 aaPredicted RBP10.94□□□□□ -0.66
CHD4-212ENST00000545083 DGKIO75912 1065 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
CHD4-212ENST00000545083 HOXA13P31271 388 aaPredicted RBP10.94□□□□□ -0.66
CHD4-212ENST00000545083 NRIP1P48552 1158 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 ARHGAP4P98171 946 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 MGAT3Q09327 533 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 LPIN1Q14693 890 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 KCNV1Q6PIU1 500 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 RUFY4Q6ZNE9 571 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 MFSD6Q6ZSS7 791 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 KLHL23Q8NBE8 558 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 VN1R2Q8NFZ6 395 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 P2RX5Q93086 422 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 PHF7Q9BWX1 381 aaPredicted RBP10.94□□□□□ -0.66
CHD4-212ENST00000545083 PLVAPQ9BX97 442 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 HELLSQ9NRZ9 838 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 TTC3P53804 2025 aa10.94□□□□□ -0.66
CHD4-212ENST00000545083 WDR87Q6ZQQ6 2873 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 ZMYM6O95789 1325 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 DHX16O60231 1041 aaKnown RBP10.93□□□□□ -0.66
CHD4-212ENST00000545083 TGFB3P10600 412 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 MX1P20591 662 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 ICAM3P32942 547 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 SEMA3FQ13275 785 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 PTPN21Q16825 1174 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 RTN4RL1Q86UN2 441 aaPredicted RBP10.93□□□□□ -0.66
CHD4-212ENST00000545083 DGKHQ86XP1 1220 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 POF1BQ8WVV4 589 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 SUSD6Q92537 303 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 GPR20Q99678 358 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 USP26Q9BXU7 913 aa10.93□□□□□ -0.66
CHD4-212ENST00000545083 PRR23AA6NEV1 266 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 NOP56O00567 594 aaKnown RBP10.92□□□□□ -0.66
CHD4-212ENST00000545083 PER2O15055 1255 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 GNAT1P11488 350 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 CCND2P30279 289 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 GATMP50440 423 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 SLC35G1Q2M3R5 365 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 PAN2Q504Q3 1202 aaKnown RBP10.92□□□□□ -0.66
CHD4-212ENST00000545083 ASPRV1Q53RT3 343 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 UTP14CQ5TAP6 766 aaKnown RBP10.92□□□□□ -0.66
CHD4-212ENST00000545083 CYFIP1Q7L576 1253 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 STAG2Q8N3U4 1231 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 PPP2R3CQ969Q6 453 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 AMNQ9BXJ7 453 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 IRF2BPLQ9H1B7 796 aa10.92□□□□□ -0.66
CHD4-212ENST00000545083 AGO3Q9H9G7 860 aaKnown RBP10.92□□□□□ -0.66
CHD4-212ENST00000545083 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
CHD4-212ENST00000545083 KDM4AO75164 1064 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 PARP1P09874 1014 aaKnown RBP10.91□□□□□ -0.66
CHD4-212ENST00000545083 PCP11498 1178 aaKnown RBP10.91□□□□□ -0.66
CHD4-212ENST00000545083 ATF7P17544 494 aaPredicted RBP10.91□□□□□ -0.66
CHD4-212ENST00000545083 MRPS9P82933 396 aaKnown RBP10.91□□□□□ -0.66
CHD4-212ENST00000545083 MCMDC2Q4G0Z9 681 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 NAALADL2Q58DX5 795 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 FBXO47Q5MNV8 452 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 METTL7BQ6UX53 244 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 CMTR2Q8IYT2 770 aaKnown RBP10.91□□□□□ -0.66
CHD4-212ENST00000545083 ENAHQ8N8S7 591 aaPredicted RBP10.91□□□□□ -0.66
CHD4-212ENST00000545083 ATP8B4Q8TF62 1192 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 ESR2Q92731 530 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 EVI5LQ96CN4 794 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 MTMR8Q96EF0 704 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 RIPOR3Q96MK2 946 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 KAT14Q9H8E8 782 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 TRPC6Q9Y210 931 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 KIAA1671Q9BY89 1806 aa10.91□□□□□ -0.66
CHD4-212ENST00000545083 EP300Q09472 2414 aaPredicted RBP10.9□□□□□ -0.66
CHD4-212ENST00000545083 NRCAMQ92823 1304 aa10.9□□□□□ -0.66
CHD4-212ENST00000545083 SPATA31C2B4DYI2 1134 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms