RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 YME1L1Q96TA2 773 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 POP1Q99575 1024 aaKnown RBP18.69■□□□□ 0.58
DDX55-212ENST00000544738 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
DDX55-212ENST00000544738 SIP14410 1827 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 RGS20O76081 388 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 LTBRP36941 435 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 PSEN2P49810 448 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 ZNF200P98182 395 aaPredicted RBP18.68■□□□□ 0.58
DDX55-212ENST00000544738 PTK7Q13308 1070 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 TRAF7Q6Q0C0 670 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 SP7Q8TDD2 431 aaPredicted RBP18.68■□□□□ 0.58
DDX55-212ENST00000544738 WNT8BQ93098 351 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 MYL10Q9BUA6 226 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 KATNAL1Q9BW62 490 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 TECTAO75443 2155 aa18.68■□□□□ 0.58
DDX55-212ENST00000544738 BAZ2BQ9UIF8 2168 aaKnown RBP18.68■□□□□ 0.58
DDX55-212ENST00000544738 NCK2O43639 380 aa18.67■□□□□ 0.58
DDX55-212ENST00000544738 GFRA3O60609 400 aa18.67■□□□□ 0.58
DDX55-212ENST00000544738 PPFIA4O75335 1185 aa18.67■□□□□ 0.58
DDX55-212ENST00000544738 STAM2O75886 525 aa18.67■□□□□ 0.58
DDX55-212ENST00000544738 COL19A1Q14993 1142 aa18.67■□□□□ 0.58
DDX55-212ENST00000544738 SMAD2Q15796 467 aaKnown RBP18.67■□□□□ 0.58
DDX55-212ENST00000544738 PIBF1Q8WXW3 757 aa18.67■□□□□ 0.58
DDX55-212ENST00000544738 CUL5Q93034 780 aa18.67■□□□□ 0.58
DDX55-212ENST00000544738 SLC12A7Q9Y666 1083 aa18.67■□□□□ 0.58
DDX55-212ENST00000544738 SPTBN4Q9H254 2564 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 TMEM221A6NGB7 291 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 M0R296 226 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 MBTPS2O43462 519 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 DLX2Q07687 328 aaPredicted RBP18.66■□□□□ 0.58
DDX55-212ENST00000544738 TRIM71Q2Q1W2 868 aaKnown RBP18.66■□□□□ 0.58
DDX55-212ENST00000544738 GNPTABQ3T906 1256 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 CELF3Q5SZQ8 465 aaKnown RBP18.66■□□□□ 0.58
DDX55-212ENST00000544738 MYSM1Q5VVJ2 828 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
DDX55-212ENST00000544738 IL31RAQ8NI17 732 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 PRRX2Q99811 253 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 IGFLR1Q9H665 355 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 FAM86C1Q9NVL1 165 aa18.66■□□□□ 0.58
DDX55-212ENST00000544738 RSPH10B2B2RC85 870 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 STXBP3O00186 592 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 CDC45O75419 566 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 RSPH10BP0C881 870 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 THPOP40225 353 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 TCF15Q12870 199 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 MFSD10Q14728 455 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 KIAA0753Q2KHM9 967 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 SYNE3Q6ZMZ3 975 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 TRIM67Q6ZTA4 783 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 BMP8AQ7Z5Y6 402 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 SGMS1Q86VZ5 419 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 SRBD1Q8N5C6 995 aaKnown RBP18.65■□□□□ 0.58
DDX55-212ENST00000544738 SMARCC2Q8TAQ2 1214 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 SPATA33Q96N06 139 aa18.65■□□□□ 0.58
DDX55-212ENST00000544738 PIK3CDO00329 1044 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 CSPG5O95196 566 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 GGPS1O95749 300 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 HOXD8P13378 290 aaPredicted RBP18.64■□□□□ 0.57
DDX55-212ENST00000544738 XRRA1Q6P2D8 792 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 TOP1MTQ969P6 601 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 NEK1Q96PY6 1258 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 MLXIPQ9HAP2 919 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 FRMPD4Q14CM0 1322 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 EMSYQ7Z589 1322 aa18.64■□□□□ 0.57
DDX55-212ENST00000544738 PLEKHA8P1O95397 391 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 F2P00734 622 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 ZNF286BP0CG31 522 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 UBA1P22314 1058 aaKnown RBP18.63■□□□□ 0.57
DDX55-212ENST00000544738 FOXK2Q01167 660 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 HYAL1Q12794 435 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 KRT32Q14532 448 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 PKN1Q16512 942 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 CTC1Q2NKJ3 1217 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 HSDL1Q3SXM5 330 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 TSGA10IPQ3SY00 556 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 INPP4AQ96PE3 977 aaPredicted RBP18.63■□□□□ 0.57
DDX55-212ENST00000544738 CACNA1HO95180 2353 aa18.63■□□□□ 0.57
DDX55-212ENST00000544738 CACNA1AO00555 2505 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 HAS3O00219 553 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 ICAM3P32942 547 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 CTNNB1P35222 781 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 MRPS9P82933 396 aaKnown RBP18.62■□□□□ 0.57
DDX55-212ENST00000544738 SP2Q02086 613 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
DDX55-212ENST00000544738 SMAD4Q13485 552 aaKnown RBP18.62■□□□□ 0.57
DDX55-212ENST00000544738 NEDD9Q14511 834 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 PLEKHG4Q58EX7 1191 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 USP17L6PQ6QN14 398 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 SKAP1Q86WV1 359 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 SEPT8Q92599 483 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 ATOH1Q92858 354 aaPredicted RBP18.62■□□□□ 0.57
DDX55-212ENST00000544738 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 PSTPIP2Q9H939 334 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 CD207Q9UJ71 328 aa18.62■□□□□ 0.57
DDX55-212ENST00000544738 MYH7BA7E2Y1 1941 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 SPATA31C2B4DYI2 1134 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 MEIS2O14770 477 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 FIBPO43427 364 aa18.61■□□□□ 0.57
DDX55-212ENST00000544738 RXRAP19793 462 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms