RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 MEX3CQ5U5Q3 659 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 STRIP1Q5VSL9 837 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 HGSNATQ68CP4 663 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 APOBEC3HQ6NTF7 200 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 AENQ8WTP8 325 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 TAF4BQ92750 862 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 CAVIN3Q969G5 261 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 EEF2KMTQ96G04 330 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 CALR3Q96L12 384 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 RUFY1Q96T51 708 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 NUDT12Q9BQG2 462 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 POLR3CQ9BUI4 534 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 LSM14BQ9BX40 385 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 KCTD10Q9H3F6 313 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 DDX4Q9NQI0 724 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 STIM2Q9P246 746 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 ARMCX3Q9UH62 379 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 INTUQ9ULD6 942 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 GTPBP10A4D1E9 387 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 RNF40O75150 1001 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 CYP3A4P08684 503 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 CRKP46108 304 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 SLC12A3P55017 1021 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
CPSF7-223ENST00000544669 ARHGAP4P98171 946 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 CLUL1Q15846 466 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 NFIL3Q16649 462 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 BMT2Q1RMZ1 405 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 C8orf74Q6P047 294 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 KRT26Q7Z3Y9 468 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 KCNK18Q7Z418 384 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 FBXO11Q86XK2 927 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 SEPT12Q8IYM1 358 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 MASTLQ96GX5 879 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 PCDHGC5Q9Y5F6 944 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 DUSP10Q9Y6W6 482 aa14.34□□□□□ -0.11
CPSF7-223ENST00000544669 FLOT1O75955 427 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 AFPP02771 609 aaKnown RBP14.33□□□□□ -0.12
CPSF7-223ENST00000544669 XRCC5P13010 732 aaKnown RBP14.33□□□□□ -0.12
CPSF7-223ENST00000544669 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
CPSF7-223ENST00000544669 SREBF1P36956 1147 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 TNNC1P63316 161 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 RASSF7Q02833 373 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 LRRC41Q15345 812 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 TTBK2Q6IQ55 1244 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 KCTD1Q719H9 257 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 FAM76AQ8TAV0 307 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 SCFD1Q8WVM8 642 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 CRYGNQ8WXF5 182 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 VTI1AQ96AJ9 217 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 PBKQ96KB5 322 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 FAM204AQ9H8W3 233 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 TYW1Q9NV66 732 aaKnown RBP14.33□□□□□ -0.12
CPSF7-223ENST00000544669 KCND2Q9NZV8 630 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 SERPINA10Q9UK55 444 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 CAPN6Q9Y6Q1 641 aa14.33□□□□□ -0.12
CPSF7-223ENST00000544669 E9PMD0 336 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 F8W031 263 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-223ENST00000544669 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 HSF2BPO75031 334 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 TBCAO75347 108 aaKnown RBP14.32□□□□□ -0.12
CPSF7-223ENST00000544669 ENTPD3O75355 529 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 PLEKP08567 350 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-223ENST00000544669 EPB41P11171 864 aaKnown RBP14.32□□□□□ -0.12
CPSF7-223ENST00000544669 NR2F2P24468 414 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 GFPT1Q06210 699 aaPredicted RBP14.32□□□□□ -0.12
CPSF7-223ENST00000544669 DDR1Q08345 913 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 KCNH2Q12809 1159 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 PAK2Q13177 524 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 BTNL9Q6UXG8 535 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 SYCE1Q8N0S2 351 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 CERS5Q8N5B7 392 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 SPAG5Q96R06 1193 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 SEL1LQ9UBV2 794 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 RABGAP1Q9Y3P9 1069 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 UBE4BO95155 1302 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 LTBP1Q14766 1721 aa14.32□□□□□ -0.12
CPSF7-223ENST00000544669 TULP2O00295 520 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 PDE2AO00408 941 aaPredicted RBP14.31□□□□□ -0.12
CPSF7-223ENST00000544669 EPHB6O15197 1021 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 EIF3DO15371 548 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPSF7-223ENST00000544669 SYF2O95926 243 aaKnown RBP14.31□□□□□ -0.12
CPSF7-223ENST00000544669 SLC16A2P36021 539 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 ICA1Q05084 483 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 SLC15A2Q16348 729 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 ECM1Q16610 540 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 KLHDC7AQ5VTJ3 777 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 ETNPPLQ8TBG4 499 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 MKNK1Q9BUB5 465 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 TLR10Q9BXR5 811 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 SUGCTQ9HAC7 445 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 MLXIPQ9HAP2 919 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 TUFT1Q9NNX1 390 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 NLRC4Q9NPP4 1024 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 OLFML3Q9NRN5 406 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 POTECB2RU33 542 aa14.31□□□□□ -0.12
CPSF7-223ENST00000544669 TULP1O00294 542 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms