RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 KRIT1O00522 736 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 PRPF3O43395 683 aaKnown RBP14□□□□□ -0.17
PDZD4-209ENST00000544474 TCP1P17987 556 aaKnown RBP14□□□□□ -0.17
PDZD4-209ENST00000544474 PLTPP55058 493 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 ELF3P78545 371 aaPredicted RBP14□□□□□ -0.17
PDZD4-209ENST00000544474 XRCC4Q13426 336 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 TRIM51Q9BSJ1 452 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 NOP53Q9NZM5 478 aaKnown RBP14□□□□□ -0.17
PDZD4-209ENST00000544474 MYH8P13535 1937 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 KLRC1P26715 233 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 PCK1P35558 622 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 ZBED6P86452 979 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 DCAF17Q5H9S7 520 aaPredicted RBP14□□□□□ -0.17
PDZD4-209ENST00000544474 EMBQ6PCB8 327 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 GLIS3Q8NEA6 775 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 TBK1Q9UHD2 729 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 CAPN11Q9UMQ6 739 aa14□□□□□ -0.17
PDZD4-209ENST00000544474 SPDYE3A6NKU9 549 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
PDZD4-209ENST00000544474 CAPN12Q6ZSI9 719 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 SPICE1Q8N0Z3 855 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 FAM81AQ8TBF8 368 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 LRRC4CQ9HCJ2 640 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 TRIM33Q9UPN9 1127 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 PTPN22Q9Y2R2 807 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 PLCG1P19174 1290 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 ENAHQ8N8S7 591 aaPredicted RBP13.99□□□□□ -0.17
PDZD4-209ENST00000544474 CCHCR1Q8TD31 782 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 MROH5Q6ZUA9 1318 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 CALM1P0DP23 149 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 CALM2P0DP24 149 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 CALM3P0DP25 149 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 IMPDH2P12268 514 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 ITGA4P13612 1032 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 KLHL30Q0D2K2 578 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 PKN1Q16512 942 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 RAPGEF5Q92565 580 aa13.99□□□□□ -0.17
PDZD4-209ENST00000544474 LSM14BQ9BX40 385 aaKnown RBP13.99□□□□□ -0.17
PDZD4-209ENST00000544474 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
PDZD4-209ENST00000544474 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 SCN11AQ9UI33 1791 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 EVI5O60447 810 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 CYP2D6P10635 497 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
PDZD4-209ENST00000544474 RNASELQ05823 741 aaKnown RBP13.98□□□□□ -0.17
PDZD4-209ENST00000544474 RPS6KA1Q15418 735 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 SUSD4Q5VX71 490 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 NCAPG2Q86XI2 1143 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 MYLK4Q86YV6 388 aaPredicted RBP13.98□□□□□ -0.17
PDZD4-209ENST00000544474 ARFGAP2Q8N6H7 521 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 TRIM4Q9C037 500 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 SAMD15Q9P1V8 674 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 CNOT8Q9UFF9 292 aaKnown RBP13.98□□□□□ -0.17
PDZD4-209ENST00000544474 FECHP22830 423 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 EEF1GP26641 437 aaKnown RBP13.98□□□□□ -0.17
PDZD4-209ENST00000544474 TPP2P29144 1249 aaPredicted RBP13.98□□□□□ -0.17
PDZD4-209ENST00000544474 HSD17B3P37058 310 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 GCLCP48506 637 aaPredicted RBP13.98□□□□□ -0.17
PDZD4-209ENST00000544474 CTCFP49711 727 aaPredicted RBP13.98□□□□□ -0.17
PDZD4-209ENST00000544474 RCAN1P53805 252 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 RFX8Q6ZV50 586 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 TLR10Q9BXR5 811 aa13.98□□□□□ -0.17
PDZD4-209ENST00000544474 TTI1O43156 1089 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 LINGO3P0C6S8 592 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 IL17AQ16552 155 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 CRELD2Q6UXH1 353 aaPredicted RBP13.97□□□□□ -0.17
PDZD4-209ENST00000544474 VGLL2Q8N8G2 317 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 ANKS4BQ8N8V4 417 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 SHISA4Q96DD7 197 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 ZFATQ9P243 1243 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 LUC7L3O95232 432 aaKnown RBP13.97□□□□□ -0.17
PDZD4-209ENST00000544474 ATP4AP20648 1035 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 KIF5BP33176 963 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 TNNC1P63316 161 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 MXRA7P84157 204 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 DBN1Q16643 649 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 LONP2Q86WA8 852 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 MTA3Q9BTC8 594 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 NDST4Q9H3R1 872 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 SH2D4AQ9H788 454 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 SERPINA10Q9UK55 444 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 SNX24Q9Y343 169 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 MMEP08473 750 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 PDIA5Q14554 519 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 FAM98CQ17RN3 349 aaKnown RBP13.97□□□□□ -0.17
PDZD4-209ENST00000544474 CABP7Q86V35 215 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 P2RX5Q93086 422 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 ZNF570Q96NI8 536 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 DBR1Q9UK59 544 aaKnown RBP13.97□□□□□ -0.17
PDZD4-209ENST00000544474 ZNF232Q9UNY5 417 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 RGPD5Q99666 1765 aa13.97□□□□□ -0.17
PDZD4-209ENST00000544474 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
PDZD4-209ENST00000544474 C4BP0C0L5 1744 aa13.96□□□□□ -0.17
PDZD4-209ENST00000544474 FAM163BP0C2L3 166 aa13.96□□□□□ -0.17
PDZD4-209ENST00000544474 ACTN1P12814 892 aa13.96□□□□□ -0.17
PDZD4-209ENST00000544474 SCG2P13521 617 aa13.96□□□□□ -0.17
PDZD4-209ENST00000544474 POLE2P56282 527 aa13.96□□□□□ -0.17
PDZD4-209ENST00000544474 KCNJ2P63252 427 aa13.96□□□□□ -0.17
PDZD4-209ENST00000544474 BLMHQ13867 455 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms