RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 VTA1Q9NP79 307 aa5.78□□□□□ -1.48
NPIPB4-219ENST00000543660 HOMER2Q9NSB8 354 aa5.78□□□□□ -1.48
NPIPB4-219ENST00000543660 INSL6Q9Y581 213 aa5.78□□□□□ -1.48
NPIPB4-219ENST00000543660 TCRBV5S4A2TA0A5A2 114 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 MED19A0JLT2 244 aaPredicted RBP5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 LOC730098B7Z3J9 87 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 SIAH2O43255 324 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 NCK2O43639 380 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 MARCH6O60337 910 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 EFCAB14O75071 495 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 KDM4AO75164 1064 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 RECKO95980 971 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 GNAI2P04899 355 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 SELPP16109 830 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 PDE6AP16499 860 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 NBL1P41271 181 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 CPT1AP50416 773 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 SIGLEC14Q08ET2 396 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 HYAL1Q12794 435 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 SMAD4Q13485 552 aaKnown RBP5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 GPM6BQ13491 265 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 IKBKEQ14164 716 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 CBX2Q14781 532 aaPredicted RBP5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 PTGISQ16647 500 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 SLC9C2Q5TAH2 1124 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 LRRC8DQ7L1W4 858 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 CAGE1Q8TC20 777 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 COL26A1Q96A83 441 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 SAMD11Q96NU1 681 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 UCN2Q96RP3 112 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 CRBNQ96SW2 442 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 WDR11Q9BZH6 1224 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 MRS2Q9HD23 443 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 ATP8A2Q9NTI2 1148 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 CYP39A1Q9NYL5 469 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 NYAP2Q9P242 653 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 FEM1BQ9UK73 627 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 NOVA2Q9UNW9 492 aaKnown RBP5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 NOD1Q9Y239 953 aa5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 CTDP1Q9Y5B0 961 aaPredicted RBP5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.77□□□□□ -1.49
NPIPB4-219ENST00000543660 ZNF532Q9HCE3 1301 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 MYH8P13535 1937 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 FRYLO94915 3013 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 LILRB3O75022 631 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 TBX10O75333 385 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 PARNO95453 639 aaKnown RBP5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 EYA4O95677 639 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 CKBP12277 381 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 GTF2F1P35269 517 aaKnown RBP eCLIP5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 MBTPS1Q14703 1052 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 TSNAXIP1Q2TAA8 658 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 TMEM164Q5U3C3 297 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 GDF6Q6KF10 455 aaPredicted RBP5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 DPH6Q7L8W6 267 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 SESTD1Q86VW0 696 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 FBXO11Q86XK2 927 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 TICAM2Q86XR7 235 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 TMEM192Q8IY95 271 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 CCDC155Q8N6L0 562 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 OR6J1Q8NGC5 347 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 MICAL1Q8TDZ2 1067 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 SSH3Q8TE77 659 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 SPIRE2Q8WWL2 714 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 NLRP7Q8WX94 980 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 MKL1Q969V6 931 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 TRERF1Q96PN7 1200 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 PURBQ96QR8 312 aaKnown RBP5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 ARMT1Q9H993 441 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 RNF146Q9NTX7 359 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 WASF2Q9Y6W5 498 aa5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 GREB1LQ9C091 1923 aaPredicted RBP5.76□□□□□ -1.49
NPIPB4-219ENST00000543660 MICAL3Q7RTP6 2002 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 MAP1BP46821 2468 aaKnown RBP5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 IGKV6D-41A0A0C4DH26 115 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 HMGB1P1B2RPK0 211 aaPredicted RBP5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 GRM6O15303 877 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 LINC01565O15544 149 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 KPNA6O60684 536 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 LGR5O75473 907 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 SURF6O75683 361 aaKnown RBP5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 PDGFBP01127 241 aaPredicted RBP5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 LINC00271P0C7V0 271 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 VSIG8P0DPA2 414 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 FDX1P10109 184 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 RASA1P20936 1047 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 IBSPP21815 317 aaPredicted RBP5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 USP46P62068 366 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 ATP8B2P98198 1209 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 SLFN5Q08AF3 891 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 KCNMA1Q12791 1236 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 OS9Q13438 667 aaPredicted RBP5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 ADAM15Q13444 863 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 TRIM71Q2Q1W2 868 aaKnown RBP5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 TKFCQ3LXA3 575 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 SLFNL1Q499Z3 407 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 MUM1L1Q5H9M0 696 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 CCDC181Q5TID7 509 aa5.75□□□□□ -1.49
NPIPB4-219ENST00000543660 CTR9Q6PD62 1173 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms