RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
CIT-212ENST00000543239 CCL23P55773 120 aa18.47■□□□□ 0.55
CIT-212ENST00000543239 RBL2Q08999 1139 aa18.47■□□□□ 0.55
CIT-212ENST00000543239 PTK7Q13308 1070 aa18.47■□□□□ 0.55
CIT-212ENST00000543239 PSRC1Q6PGN9 363 aaPredicted RBP18.47■□□□□ 0.55
CIT-212ENST00000543239 KRT25Q7Z3Z0 450 aa18.47■□□□□ 0.55
CIT-212ENST00000543239 TBCKQ8TEA7 893 aa18.47■□□□□ 0.55
CIT-212ENST00000543239 IL23AQ9NPF7 189 aa18.47■□□□□ 0.55
CIT-212ENST00000543239 SH2B1Q9NRF2 756 aaPredicted RBP18.47■□□□□ 0.55
CIT-212ENST00000543239 C17orf102A2RUQ5 167 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 LGR5O75473 907 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 ACTR2P61160 394 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 ST3GAL1Q11201 340 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 NONOQ15233 471 aaKnown RBP eCLIP18.46■□□□□ 0.55
CIT-212ENST00000543239 PRR16Q569H4 304 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 MOXD1Q6UVY6 613 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 RETREG2Q8NC44 543 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 LENG9Q96B70 501 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 LLPHQ9BRT6 129 aaKnown RBP18.46■□□□□ 0.55
CIT-212ENST00000543239 ZNF577Q9BSK1 485 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 SMARCAD1Q9H4L7 1026 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 TBC1D22BQ9NU19 505 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 ERAP1Q9NZ08 941 aa18.46■□□□□ 0.55
CIT-212ENST00000543239 TANC1Q9C0D5 1861 aa18.46■□□□□ 0.54
CIT-212ENST00000543239 SOX1O00570 391 aaPredicted RBP18.45■□□□□ 0.54
CIT-212ENST00000543239 DHX15O43143 795 aaKnown RBP18.45■□□□□ 0.54
CIT-212ENST00000543239 EDIL3O43854 480 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 ST18O60284 1047 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 ATG7O95352 703 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 PFKMP08237 780 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 GNAT1P11488 350 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 RFC2P35250 354 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 SERINC5Q86VE9 423 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 RPUSD2Q8IZ73 545 aaKnown RBP18.45■□□□□ 0.54
CIT-212ENST00000543239 DHX38Q92620 1227 aaKnown RBP18.45■□□□□ 0.54
CIT-212ENST00000543239 GLG1Q92896 1179 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 RNPC3Q96LT9 517 aaKnown RBP18.45■□□□□ 0.54
CIT-212ENST00000543239 TBC1D32Q96NH3 1257 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.45■□□□□ 0.54
CIT-212ENST00000543239 RNPEPQ9H4A4 650 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 AZI2Q9H6S1 392 aa18.45■□□□□ 0.54
CIT-212ENST00000543239 CYP3A7-CYP3A51PA0A087WV96 503 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 CCDC194A0A1B0GVG4 234 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 JAK2O60674 1132 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 DTNBO60941 627 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 CYP3A7P24462 503 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 HIC1Q14526 733 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 TMEM240Q5SV17 173 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 GPR153Q6NV75 609 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 CCDC83Q8IWF9 413 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 ATP6V0A1Q93050 837 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 SCLYQ96I15 445 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 PCYT2Q99447 389 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 BRMS1Q9HCU9 246 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 GJB4Q9NTQ9 266 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 TCEAL9Q9UHQ7 104 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 NRCAMQ92823 1304 aa18.44■□□□□ 0.54
CIT-212ENST00000543239 PARNO95453 639 aaKnown RBP18.43■□□□□ 0.54
CIT-212ENST00000543239 CCNE2O96020 404 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 IQCF3P0C7M6 154 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 SELPP16109 830 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 ADAM17P78536 824 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
CIT-212ENST00000543239 KRT76Q01546 638 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 TRIM71Q2Q1W2 868 aaKnown RBP18.43■□□□□ 0.54
CIT-212ENST00000543239 Q4G0T1 1027 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 ZNF746Q6NUN9 644 aaPredicted RBP18.43■□□□□ 0.54
CIT-212ENST00000543239 ZNF365Q70YC5 407 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 PLPPR4Q7Z2D5 763 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 TNPO1Q92973 898 aaKnown RBP18.43■□□□□ 0.54
CIT-212ENST00000543239 MBOAT7Q96N66 472 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
CIT-212ENST00000543239 LAMA3Q16787 3333 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 IGKV6D-21A0A0A0MT36 114 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 DDX39AO00148 427 aaKnown RBP18.42■□□□□ 0.54
CIT-212ENST00000543239 FGBP02675 491 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 ACRP10323 421 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 CKBP12277 381 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 KRT2P35908 639 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 SLC26A2P50443 739 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 STAT5BP51692 787 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 HMGN5P82970 282 aaKnown RBP18.42■□□□□ 0.54
CIT-212ENST00000543239 TRIM29Q14134 588 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 INF2Q27J81 1249 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 RASIP1Q5U651 963 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 ABHD15Q6UXT9 468 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 LRRC8DQ7L1W4 858 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 SMAP1Q8IYB5 467 aaPredicted RBP18.42■□□□□ 0.54
CIT-212ENST00000543239 OXER1Q8TDS5 423 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 LMBR1Q8WVP7 490 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 LRCH3Q96II8 777 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 RIT2Q99578 217 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 NAP1L4Q99733 375 aaKnown RBP18.42■□□□□ 0.54
CIT-212ENST00000543239 MTIF3Q9H2K0 278 aaKnown RBP18.42■□□□□ 0.54
CIT-212ENST00000543239 SETD4Q9NVD3 440 aa18.42■□□□□ 0.54
CIT-212ENST00000543239 MSH4O15457 936 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 TREHO43280 583 aa18.41■□□□□ 0.54
CIT-212ENST00000543239 CAND2O75155 1236 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms