RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 GABPAQ06546 454 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 ADGRF4Q8IZF3 695 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 TMX4Q9H1E5 349 aaPredicted RBP18.28■□□□□ 0.52
KDM2B-216ENST00000543025 PCDHA12Q9UN75 941 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 FOCADQ5VW36 1801 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 IGKV6D-41A0A0C4DH26 115 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 C21orf2O43822 256 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 NOL4O94818 638 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 TTLL1O95922 423 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 AKR1B1P15121 316 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 GCFC2P16383 781 aaKnown RBP18.28■□□□□ 0.52
KDM2B-216ENST00000543025 ZNF543Q08ER8 600 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 HYIQ5T013 277 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 SH3GL2Q99962 352 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 RBM12Q9NTZ6 932 aaKnown RBP18.28■□□□□ 0.52
KDM2B-216ENST00000543025 OPA1O60313 960 aa18.27■□□□□ 0.52
KDM2B-216ENST00000543025 MRPL12P52815 198 aaKnown RBP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 MARSP56192 900 aaKnown RBP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 PPFIA1Q13136 1202 aa18.27■□□□□ 0.52
KDM2B-216ENST00000543025 PICALMQ13492 652 aa18.27■□□□□ 0.52
KDM2B-216ENST00000543025 DPP8Q6V1X1 898 aaPredicted RBP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 CAVIN3Q969G5 261 aa18.27■□□□□ 0.52
KDM2B-216ENST00000543025 LSM14BQ9BX40 385 aaKnown RBP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 TLR2O60603 784 aa18.27■□□□□ 0.52
KDM2B-216ENST00000543025 PPP1R11O60927 126 aaPredicted RBP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 POLR2FP61218 127 aaKnown RBP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 MRPS25P82663 173 aaKnown RBP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 CCDC65Q8IXS2 484 aa18.27■□□□□ 0.52
KDM2B-216ENST00000543025 DAGLAQ9Y4D2 1042 aa18.27■□□□□ 0.52
KDM2B-216ENST00000543025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.27■□□□□ 0.52
KDM2B-216ENST00000543025 C6orf229H3BNL8 230 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 SSBP05455 408 aaKnown RBP eCLIP18.26■□□□□ 0.51
KDM2B-216ENST00000543025 ALS2CLQ60I27 953 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 RUFY1Q96T51 708 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 TRIM34Q9BYJ4 488 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 FHDC1Q9C0D6 1143 aaPredicted RBP18.26■□□□□ 0.51
KDM2B-216ENST00000543025 SLC18A3Q16572 532 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 GBP6Q6ZN66 633 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 CLEC10AQ8IUN9 316 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 TRIM59Q8IWR1 403 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 NAP1L4Q99733 375 aaKnown RBP18.26■□□□□ 0.51
KDM2B-216ENST00000543025 PLEKHA4Q9H4M7 779 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 ARFGEF1Q9Y6D6 1849 aa18.26■□□□□ 0.51
KDM2B-216ENST00000543025 NNTQ13423 1086 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 NAB2Q15742 525 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
KDM2B-216ENST00000543025 GJA10Q969M2 543 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 MS4A14Q96JA4 679 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 TBC1D7Q9P0N9 293 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 PCDHA2Q9Y5H9 948 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 ZBTB5O15062 677 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 HSF2BPO75031 334 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 PALMO75781 387 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 EPB41P11171 864 aaKnown RBP18.25■□□□□ 0.51
KDM2B-216ENST00000543025 GPATCH4Q5T3I0 446 aaKnown RBP18.25■□□□□ 0.51
KDM2B-216ENST00000543025 CC2D2BQ6DHV5 1058 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 NELFCDQ8IXH7 590 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 IFT20Q8IY31 132 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 FGFBP2Q9BYJ0 223 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 KIAA1024Q9UPX6 916 aa18.25■□□□□ 0.51
KDM2B-216ENST00000543025 E9PMD0 336 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 DNAJC21Q5F1R6 531 aaKnown RBP18.24■□□□□ 0.51
KDM2B-216ENST00000543025 TSEN2Q8NCE0 465 aaKnown RBP18.24■□□□□ 0.51
KDM2B-216ENST00000543025 TBC1D5Q92609 795 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 PSTPIP2Q9H939 334 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 SWAP70Q9UH65 585 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 PLA2G4BP0C869 781 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 KLRC1P26715 233 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 RAPGEF1Q13905 1077 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 TTBK2Q6IQ55 1244 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 CAPS2Q9BXY5 557 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 KCTD10Q9H3F6 313 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 SERPINB13Q9UIV8 391 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 PCDHGC5Q9Y5F6 944 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
KDM2B-216ENST00000543025 GRID2IPA4D2P6 1211 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 EPS15P42566 896 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 MAGEA9P43362 315 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 IRAK1P51617 712 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 CORO7P57737 925 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 HERC4Q5GLZ8 1057 aaPredicted RBP18.23■□□□□ 0.51
KDM2B-216ENST00000543025 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 SCFD1Q8WVM8 642 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 GDF3Q9NR23 364 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 EMILIN3Q9NT22 766 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 AIPL1Q9NZN9 384 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 MYO3BQ8WXR4 1341 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 MYH7BA7E2Y1 1941 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 KLHL30Q0D2K2 578 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 GPBP1Q86WP2 473 aa18.23■□□□□ 0.51
KDM2B-216ENST00000543025 ZC3H3Q8IXZ2 948 aaKnown RBP18.23■□□□□ 0.51
KDM2B-216ENST00000543025 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.23■□□□□ 0.51
KDM2B-216ENST00000543025 SLC26A4O43511 780 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 SLC16A2P36021 539 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 ADAM9Q13443 819 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 KIAA0753Q2KHM9 967 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 EDRF1Q3B7T1 1238 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 MEI1Q5TIA1 1274 aa18.22■□□□□ 0.51
KDM2B-216ENST00000543025 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms