RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 CNOT4O95628 575 aaKnown RBP3.87□□□□□ -1.79
KNTC1-213ENST00000542727 KNG1P01042 644 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 FAHP16930 419 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 ERCC5P28715 1186 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-213ENST00000542727 PAN2Q504Q3 1202 aaKnown RBP3.87□□□□□ -1.79
KNTC1-213ENST00000542727 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-213ENST00000542727 PALM2Q8IXS6 379 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 Q8N1X5 172 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 NUDT10Q8NFP7 164 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.87□□□□□ -1.79
KNTC1-213ENST00000542727 NUDT11Q96G61 164 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 IER2Q9BTL4 223 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 PHF20Q9BVI0 1012 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 MRIQ9BWK5 157 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 SCAND2PQ9GZW5 306 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-213ENST00000542727 KATNBL1Q9H079 304 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 SLITRK6Q9H5Y7 841 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 KCND1Q9NSA2 647 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 ARHGAP20Q9P2F6 1191 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 WASF3Q9UPY6 502 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 A0A1W2PQU0 124 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 H0Y858 1186 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 FGRP09769 529 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 FGFR1P11362 822 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 GNAT1P11488 350 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 EPHA5P54756 1037 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 PURAQ00577 322 aaKnown RBP3.86□□□□□ -1.79
KNTC1-213ENST00000542727 TUSC3Q13454 348 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 PRKD1Q15139 912 aaPredicted RBP3.86□□□□□ -1.79
KNTC1-213ENST00000542727 SKIDA1Q1XH10 827 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 HABP4Q5JVS0 413 aaKnown RBP3.86□□□□□ -1.79
KNTC1-213ENST00000542727 CD276Q5ZPR3 534 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 DPP8Q6V1X1 898 aaPredicted RBP3.86□□□□□ -1.79
KNTC1-213ENST00000542727 LBX2Q6XYB7 198 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 USP53Q70EK8 1073 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 Q8TCH9 128 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 CLEC4DQ8WXI8 215 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 WWC2-AS2Q96NR7 200 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 LMF1Q96S06 567 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 AARSD1Q9BTE6 412 aaKnown RBP3.86□□□□□ -1.79
KNTC1-213ENST00000542727 PCED1AQ9H1Q7 454 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 ZNF408Q9H9D4 720 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 ZFP69BQ9UJL9 534 aa3.86□□□□□ -1.79
KNTC1-213ENST00000542727 ZNF839A8K0R7 811 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 FAM47E-STBD1D6RA91 191 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 DLX3O60479 287 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 SLPIP03973 132 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 CKMP06732 381 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 CSF2RBP32927 897 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 ETFBP38117 255 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 GRIA2P42262 883 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 GPR85P60893 370 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 ARID5AQ03989 594 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 GRIN1Q05586 938 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 USP10Q14694 798 aaKnown RBP3.85□□□□□ -1.79
KNTC1-213ENST00000542727 DDR2Q16832 855 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 ZMAT1Q5H9K5 638 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 SPDYAQ5MJ70 313 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 STYK1Q6J9G0 422 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 KCTD1Q719H9 257 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 IFNL3Q8IZI9 196 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 ST13P5Q8NFI4 369 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-213ENST00000542727 MICAL1Q8TDZ2 1067 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 EDAQ92838 391 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 ZNF669Q96BR6 464 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-213ENST00000542727 JAM3Q9BX67 310 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 DSEQ9UL01 958 aa3.85□□□□□ -1.79
KNTC1-213ENST00000542727 MSCO60682 206 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 AMHP03971 560 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 POLD1P28340 1107 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 PFKPQ01813 784 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 ZFPM1Q8IX07 1006 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 NLGN4XQ8N0W4 816 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 LRRC47Q8N1G4 583 aaKnown RBP3.84□□□□□ -1.79
KNTC1-213ENST00000542727 GIMAP8Q8ND71 665 aaPredicted RBP3.84□□□□□ -1.79
KNTC1-213ENST00000542727 SCYL1Q96KG9 808 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 PTPN18Q99952 460 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 ALG1Q9BT22 464 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 CARD11Q9BXL7 1154 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 RBPJLQ9UBG7 517 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 FBXO10Q9UK96 956 aa3.84□□□□□ -1.79
KNTC1-213ENST00000542727 ZFR2Q9UPR6 939 aaKnown RBP3.84□□□□□ -1.79
KNTC1-213ENST00000542727 SOD2P04179 222 aa3.83□□□□□ -1.8
KNTC1-213ENST00000542727 PABPC1P11940 636 aaKnown RBP3.83□□□□□ -1.8
KNTC1-213ENST00000542727 COMTP21964 271 aa3.83□□□□□ -1.8
KNTC1-213ENST00000542727 RAC3P60763 192 aa3.83□□□□□ -1.8
KNTC1-213ENST00000542727 MIIPQ5JXC2 388 aa3.83□□□□□ -1.8
KNTC1-213ENST00000542727 TCTN3Q6NUS6 607 aa3.83□□□□□ -1.8
KNTC1-213ENST00000542727 STPG3Q8N7X2 389 aa3.83□□□□□ -1.8
KNTC1-213ENST00000542727 NEIL1Q96FI4 390 aaPredicted RBP3.83□□□□□ -1.8
KNTC1-213ENST00000542727 MENTQ9BUN1 341 aa3.83□□□□□ -1.8
KNTC1-213ENST00000542727 PPARGC1AQ9UBK2 798 aaKnown RBP3.83□□□□□ -1.8
KNTC1-213ENST00000542727 TRAV20A0A0B4J274 112 aa3.82□□□□□ -1.8
KNTC1-213ENST00000542727 OVOL3O00110 214 aa3.82□□□□□ -1.8
KNTC1-213ENST00000542727 FOXS1O43638 330 aa3.82□□□□□ -1.8
KNTC1-213ENST00000542727 NAT1P18440 290 aa3.82□□□□□ -1.8
KNTC1-213ENST00000542727 GJA4P35212 333 aa3.82□□□□□ -1.8
KNTC1-213ENST00000542727 GLRBP48167 497 aa3.82□□□□□ -1.8
KNTC1-213ENST00000542727 IFRD2Q12894 506 aaPredicted RBP3.82□□□□□ -1.8
KNTC1-213ENST00000542727 FOXE3Q13461 319 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms