RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SEPT1Q8WYJ6 367 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 UNC93B1Q9H1C4 597 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 PCDHA7Q9UN72 937 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 PCDHA10Q9Y5I2 948 aa26■■□□□ 1.75
HOMER3-205ENST00000542541 CCNE2O96020 404 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 NCAPH2Q6IBW4 605 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 ERMNQ8TAM6 284 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 ZNF333Q96JL9 665 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 DISC1Q9NRI5 854 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 POTEMA6NI47 508 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 CCL5P13501 91 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 CPT1AP50416 773 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 GJA9P57773 515 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 HSDL1Q3SXM5 330 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 MIS18BP1Q6P0N0 1132 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 AFG1LQ8WV93 481 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 LENG1Q96BZ8 264 aaPredicted RBP25.99■■□□□ 1.75
HOMER3-205ENST00000542541 RNF208Q9H0X6 261 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 CSRNP2Q9H175 543 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 XPNPEP3Q9NQH7 507 aa25.99■■□□□ 1.75
HOMER3-205ENST00000542541 GOLGA6L4A6NEF3 574 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 GOLGA6L22H0YM25 854 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 PPFIA4O75335 1185 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 ATG7O95352 703 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 PSAPP07602 524 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 EPHA7Q15375 998 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 ADALQ6DHV7 355 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 CLIC6Q96NY7 704 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 GPR20Q99678 358 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 MCOLN1Q9GZU1 580 aa25.98■■□□□ 1.75
HOMER3-205ENST00000542541 UPF3AQ9H1J1 476 aaKnown RBP25.98■■□□□ 1.75
HOMER3-205ENST00000542541 PAK6Q9NQU5 681 aaPredicted RBP25.98■■□□□ 1.75
HOMER3-205ENST00000542541 A6NJR5 290 aa25.97■■□□□ 1.75
HOMER3-205ENST00000542541 MTFR1Q15390 333 aa25.97■■□□□ 1.75
HOMER3-205ENST00000542541 COL13A1Q5TAT6 717 aaPredicted RBP25.97■■□□□ 1.75
HOMER3-205ENST00000542541 KRT79Q5XKE5 535 aa25.97■■□□□ 1.75
HOMER3-205ENST00000542541 TMEM87AQ8NBN3 555 aa25.97■■□□□ 1.75
HOMER3-205ENST00000542541 EML1O00423 815 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 C6orf222P0C671 652 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-205ENST00000542541 PTGS1P23219 599 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 UBA7P41226 1012 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 NKX3-2P78367 333 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 GRIN1Q05586 938 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 AXDND1Q5T1B0 1012 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-205ENST00000542541 HAUS3Q68CZ6 603 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 ABHD15Q6UXT9 468 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 SYNRGQ9UMZ2 1314 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 GSTTP1A0A1W2PQM5 241 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 MYCP01106 439 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-205ENST00000542541 TCF7P36402 384 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-205ENST00000542541 FSCN1Q16658 493 aaKnown RBP25.96■■□□□ 1.75
HOMER3-205ENST00000542541 DGKDQ16760 1214 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 LHX8Q68G74 356 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 NEK9Q8TD19 979 aa25.96■■□□□ 1.75
HOMER3-205ENST00000542541 ZEB2O60315 1214 aa25.95■■□□□ 1.74
HOMER3-205ENST00000542541 PGK1P00558 417 aa25.95■■□□□ 1.74
HOMER3-205ENST00000542541 SUPT20HL2P0C7V6 817 aa25.95■■□□□ 1.74
HOMER3-205ENST00000542541 TXLNAP40222 546 aa25.95■■□□□ 1.74
HOMER3-205ENST00000542541 RNF180Q86T96 592 aa25.95■■□□□ 1.74
HOMER3-205ENST00000542541 AZI2Q9H6S1 392 aa25.95■■□□□ 1.74
HOMER3-205ENST00000542541 POTEFA5A3E0 1075 aa25.94■■□□□ 1.74
HOMER3-205ENST00000542541 BACH1O14867 736 aa25.94■■□□□ 1.74
HOMER3-205ENST00000542541 SLC26A4O43511 780 aa25.94■■□□□ 1.74
HOMER3-205ENST00000542541 KPNA6O60684 536 aa25.94■■□□□ 1.74
HOMER3-205ENST00000542541 P4HBP07237 508 aaKnown RBP25.94■■□□□ 1.74
HOMER3-205ENST00000542541 MMP3P08254 477 aa25.94■■□□□ 1.74
HOMER3-205ENST00000542541 GNASQ5JWF2 1037 aa25.94■■□□□ 1.74
HOMER3-205ENST00000542541 ARRDC4Q8NCT1 418 aa25.94■■□□□ 1.74
HOMER3-205ENST00000542541 EIF2AK1Q9BQI3 630 aaKnown RBP25.94■■□□□ 1.74
HOMER3-205ENST00000542541 TCHHQ07283 1943 aa25.94■■□□□ 1.74
HOMER3-205ENST00000542541 A0A1W2PQ27 194 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 A0A1W2PQ64 194 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 A0A1W2PQD8 194 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 DKC1O60832 514 aaKnown RBP eCLIP25.93■■□□□ 1.74
HOMER3-205ENST00000542541 ADAMTS4O75173 837 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 HOXD8P13378 290 aaPredicted RBP25.93■■□□□ 1.74
HOMER3-205ENST00000542541 FAM160B1Q5W0V3 765 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 SWSAP1Q6NVH7 229 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 SNX29Q8TEQ0 813 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 DEFB118Q96PH6 123 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 HSD17B14Q9BPX1 270 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 POLR3CQ9BUI4 534 aaPredicted RBP25.93■■□□□ 1.74
HOMER3-205ENST00000542541 FAM13BQ9NYF5 915 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 TELO2Q9Y4R8 837 aa25.93■■□□□ 1.74
HOMER3-205ENST00000542541 IGKV6D-21A0A0A0MT36 114 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 CMA1P23946 247 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 RPA1P27694 616 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 CST5P28325 142 aaPredicted RBP25.92■■□□□ 1.74
HOMER3-205ENST00000542541 CDC25AP30304 524 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 SPECC1Q5M775 1068 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 PCSK9Q8NBP7 692 aaKnown RBP25.92■■□□□ 1.74
HOMER3-205ENST00000542541 ATP6V0A1Q93050 837 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 CCSER1Q9C0I3 900 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 TUFT1Q9NNX1 390 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 ZNF302Q9NR11 478 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 PP2D1A8MPX8 630 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 CCT6AP40227 531 aaKnown RBP25.92■■□□□ 1.74
HOMER3-205ENST00000542541 QARSP47897 775 aaKnown RBP25.92■■□□□ 1.74
HOMER3-205ENST00000542541 STAT5BP51692 787 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 PSMC5P62195 406 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms