RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 SOX1O00570 391 aaPredicted RBP22.82■■□□□ 1.24
CACNA2D4-215ENST00000542340 EDIL3O43854 480 aa22.82■■□□□ 1.24
CACNA2D4-215ENST00000542340 DTNBO60941 627 aa22.82■■□□□ 1.24
CACNA2D4-215ENST00000542340 HOXC8P31273 242 aa22.82■■□□□ 1.24
CACNA2D4-215ENST00000542340 PTK7Q13308 1070 aa22.82■■□□□ 1.24
CACNA2D4-215ENST00000542340 RABEP1Q15276 862 aa22.82■■□□□ 1.24
CACNA2D4-215ENST00000542340 TBCKQ8TEA7 893 aa22.82■■□□□ 1.24
CACNA2D4-215ENST00000542340 SMARCAD1Q9H4L7 1026 aa22.82■■□□□ 1.24
CACNA2D4-215ENST00000542340 LAMA3Q16787 3333 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 C17orf102A2RUQ5 167 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 SMIM10L2AP0DMW4 78 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 SMIM10L2BP0DMW5 78 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 ACTR2P61160 394 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 ST3GAL1Q11201 340 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 PRR16Q569H4 304 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 TMEM240Q5SV17 173 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 PSRC1Q6PGN9 363 aaPredicted RBP22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 KRT25Q7Z3Z0 450 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 RPUSD2Q8IZ73 545 aaKnown RBP22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 LENG9Q96B70 501 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 ZNF577Q9BSK1 485 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 RNPEPQ9H4A4 650 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 TBC1D22BQ9NU19 505 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 ERAP1Q9NZ08 941 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 EMSYQ7Z589 1322 aa22.81■■□□□ 1.24
CACNA2D4-215ENST00000542340 DHX15O43143 795 aaKnown RBP22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 LGR5O75473 907 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 ATG7O95352 703 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 ACRP10323 421 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 GNAT1P11488 350 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 ZNF200P98182 395 aaPredicted RBP22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 RBL2Q08999 1139 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 HIC1Q14526 733 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 NONOQ15233 471 aaKnown RBP eCLIP22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 AFAP1L1Q8TED9 768 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 DHX38Q92620 1227 aaKnown RBP22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 GLG1Q92896 1179 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 SCLYQ96I15 445 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 RNPC3Q96LT9 517 aaKnown RBP22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 SH2B1Q9NRF2 756 aaPredicted RBP22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 GJB4Q9NTQ9 266 aa22.8■■□□□ 1.24
CACNA2D4-215ENST00000542340 JAK2O60674 1132 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 IQCF3P0C7M6 154 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 RFC2P35250 354 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 GPR153Q6NV75 609 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 ZNF365Q70YC5 407 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 SERINC5Q86VE9 423 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 ATP6V0A1Q93050 837 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 LRCH3Q96II8 777 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 LLPHQ9BRT6 129 aaKnown RBP22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 AZI2Q9H6S1 392 aa22.79■■□□□ 1.24
CACNA2D4-215ENST00000542340 CYP3A7-CYP3A51PA0A087WV96 503 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 CCDC194A0A1B0GVG4 234 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 CCNE2O96020 404 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 FGBP02675 491 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 PFKMP08237 780 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 CYP3A7P24462 503 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 Q4G0T1 1027 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 PCYT2Q99447 389 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 SETD4Q9NVD3 440 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 NRCAMQ92823 1304 aa22.78■■□□□ 1.24
CACNA2D4-215ENST00000542340 IGKV6D-21A0A0A0MT36 114 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 DDX39AO00148 427 aaKnown RBP22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 ST18O60284 1047 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 CKBP12277 381 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 SELPP16109 830 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 ADAM17P78536 824 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 TRIM71Q2Q1W2 868 aaKnown RBP22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 MOXD1Q6UVY6 613 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 PLPPR4Q7Z2D5 763 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 CCDC83Q8IWF9 413 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 VWCEQ96DN2 955 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 TBC1D32Q96NH3 1257 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 GTF3C3Q9Y5Q9 886 aa22.77■■□□□ 1.24
CACNA2D4-215ENST00000542340 MSH4O15457 936 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 TREHO43280 583 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 PARNO95453 639 aaKnown RBP22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 STAT5BP51692 787 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 KRT76Q01546 638 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 INF2Q27J81 1249 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 RASIP1Q5U651 963 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 ZNF746Q6NUN9 644 aaPredicted RBP22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 ABHD15Q6UXT9 468 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 OXER1Q8TDS5 423 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 HERVK_113Q902F9 699 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 TNPO1Q92973 898 aaKnown RBP22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 MBOAT7Q96N66 472 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 UIMC1Q96RL1 719 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 RIT2Q99578 217 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 BRMS1Q9HCU9 246 aa22.76■■□□□ 1.23
CACNA2D4-215ENST00000542340 MARK3P27448 753 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 KRT2P35908 639 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 SLC26A2P50443 739 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 TRIM29Q14134 588 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 MIS18BP1Q6P0N0 1132 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 LRRC8DQ7L1W4 858 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 LMBR1Q8WVP7 490 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 WNT8BQ93098 351 aa22.75■■□□□ 1.23
CACNA2D4-215ENST00000542340 MTIF3Q9H2K0 278 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms