RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 NAA35Q5VZE5 725 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 ADGRF4Q8IZF3 695 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 AK8Q96MA6 479 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 PSTPIP2Q9H939 334 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 MTMR4Q9NYA4 1195 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 DDX25Q9UHL0 483 aaKnown RBP16.84■□□□□ 0.29
CNOT9-208ENST00000542068 KIAA1024Q9UPX6 916 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 PLAAQ9Y263 795 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 PPEF1O14829 653 aaPredicted RBP16.83■□□□□ 0.29
CNOT9-208ENST00000542068 HLA-DOAP06340 250 aa16.83■□□□□ 0.29
CNOT9-208ENST00000542068 PAK2Q13177 524 aa16.83■□□□□ 0.29
CNOT9-208ENST00000542068 UNC13DQ70J99 1090 aa16.83■□□□□ 0.29
CNOT9-208ENST00000542068 BMP2KQ9NSY1 1161 aaPredicted RBP16.83■□□□□ 0.29
CNOT9-208ENST00000542068 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.29
CNOT9-208ENST00000542068 E9PMD0 336 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 LSP1P33241 339 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 RHBDL3P58872 404 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
CNOT9-208ENST00000542068 HERC4Q5GLZ8 1057 aaPredicted RBP16.83■□□□□ 0.28
CNOT9-208ENST00000542068 TCERG1LQ5VWI1 586 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 ZFPM1Q8IX07 1006 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 MYOCDQ8IZQ8 938 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 CUEDC2Q9H467 287 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.83■□□□□ 0.28
CNOT9-208ENST00000542068 PPP4CP60510 307 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 ALS2CLQ60I27 953 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 ZNF662Q6ZS27 426 aa16.83■□□□□ 0.28
CNOT9-208ENST00000542068 LAD1O00515 517 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 PRPHP41219 470 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 UBLCP1Q8WVY7 318 aaPredicted RBP16.82■□□□□ 0.28
CNOT9-208ENST00000542068 GJD4Q96KN9 370 aaPredicted RBP16.82■□□□□ 0.28
CNOT9-208ENST00000542068 SH3GL2Q99962 352 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 FGFR1OPO95684 399 aaKnown RBP16.82■□□□□ 0.28
CNOT9-208ENST00000542068 TMOD1P28289 359 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 HGSNATQ68CP4 663 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 GBP6Q6ZN66 633 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 PANK4Q9NVE7 773 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
CNOT9-208ENST00000542068 GOLGA6L10A6NI86 522 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 GUCY2CP25092 1073 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 ZNF76P36508 570 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 UBXN2AP68543 259 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 CDK17Q00537 523 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 DDR1Q08345 913 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 PRR16Q569H4 304 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 FIGNQ5HY92 759 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 LRRC55Q6ZSA7 311 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 SPZ1Q9BXG8 430 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 DDX47Q9H0S4 455 aaKnown RBP16.81■□□□□ 0.28
CNOT9-208ENST00000542068 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 TTLL1O95922 423 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 DCAF17Q5H9S7 520 aaPredicted RBP16.81■□□□□ 0.28
CNOT9-208ENST00000542068 GALNT17Q6IS24 598 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 TBC1D22AQ8WUA7 517 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 SPAG5Q96R06 1193 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 SMIM23A6NLE4 172 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 CHMP2AO43633 222 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 BBOX1O75936 387 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 COASYQ13057 564 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 PRPF4BQ13523 1007 aaKnown RBP16.81■□□□□ 0.28
CNOT9-208ENST00000542068 FAM26FQ5R3K3 315 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 RAD54LQ92698 747 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 DPH5Q9H2P9 285 aa16.81■□□□□ 0.28
CNOT9-208ENST00000542068 DOCK2Q92608 1830 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
CNOT9-208ENST00000542068 GUF1Q8N442 669 aaKnown RBP16.8■□□□□ 0.28
CNOT9-208ENST00000542068 POTEB3A0JP26 581 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 POTECB2RU33 542 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 MRPL12P52815 198 aaKnown RBP16.8■□□□□ 0.28
CNOT9-208ENST00000542068 RPS6KA1Q15418 735 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 ASIC2Q16515 512 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 KCNV1Q6PIU1 500 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 POTEBQ6S5H4 581 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 CERS5Q8N5B7 392 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 CUL5Q93034 780 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 JPH2Q9BR39 696 aaPredicted RBP16.8■□□□□ 0.28
CNOT9-208ENST00000542068 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 SCAF8Q9UPN6 1271 aaKnown RBP16.8■□□□□ 0.28
CNOT9-208ENST00000542068 NOL4O94818 638 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 MCTP2Q6DN12 878 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 ZNF473Q8WTR7 871 aaKnown RBP16.8■□□□□ 0.28
CNOT9-208ENST00000542068 CCT8L2Q96SF2 557 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 MAGEF1Q9HAY2 307 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 PKD2L1Q9P0L9 805 aa16.8■□□□□ 0.28
CNOT9-208ENST00000542068 AFF2P51816 1311 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 SLC9A1P19634 815 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 HNRNPH3P31942 346 aaKnown RBP16.79■□□□□ 0.28
CNOT9-208ENST00000542068 FKBP3Q00688 224 aaKnown RBP16.79■□□□□ 0.28
CNOT9-208ENST00000542068 PABPC4Q13310 644 aaKnown RBP eCLIP16.79■□□□□ 0.285e-15■□□□□ 9.5
CNOT9-208ENST00000542068 DAGLBQ8NCG7 672 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 NHSL1Q5SYE7 1610 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 SERPING1P05155 500 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 ADAM9Q13443 819 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 IQCKQ8N0W5 287 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 TEKT1Q969V4 418 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 CD248Q9HCU0 757 aa16.79■□□□□ 0.28
CNOT9-208ENST00000542068 GRID2IPA4D2P6 1211 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms