RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ASXL2Q76L83 1435 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 AQP7O14520 342 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 SLC27A2O14975 620 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 RPL13P26373 211 aaKnown RBP5.76□□□□□ -1.49
SNHG1-217ENST00000541578 GYS2P54840 703 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 NT5DC1Q5TFE4 455 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 TEPPQ6URK8 271 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 MAMDC2Q7Z304 686 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-217ENST00000541578 PTPRN2Q92932 1015 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 TEPSINQ96N21 525 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 DHRS4Q9BTZ2 278 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 USP40Q9NVE5 1235 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 TRAF6Q9Y4K3 522 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 ERCC6Q03468 1493 aa5.76□□□□□ -1.49
SNHG1-217ENST00000541578 NOBOXO60393 691 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 FOXD2O60548 495 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-217ENST00000541578 ASMTLO95671 621 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 LRG1P02750 347 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 GJA9P57773 515 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 PAK1Q13153 545 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 TUSC3Q13454 348 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 ZC3H12BQ5HYM0 836 aaKnown RBP5.75□□□□□ -1.49
SNHG1-217ENST00000541578 CT47A1Q5JQC4 288 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-217ENST00000541578 ERICH6BQ5W0A0 696 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 PRPF38AQ8NAV1 312 aaKnown RBP5.75□□□□□ -1.49
SNHG1-217ENST00000541578 ZSWIM2Q8NEG5 633 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 CLEC4DQ8WXI8 215 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 CEP89Q96ST8 783 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 IPPKQ9H8X2 491 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 DSEQ9UL01 958 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 PTCH2Q9Y6C5 1203 aa5.75□□□□□ -1.49
SNHG1-217ENST00000541578 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 NAT1P18440 290 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 GABREP78334 506 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 GUCY1A3Q02108 690 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 GRIN1Q05586 938 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 ADAM9Q13443 819 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 KIAA0907Q7Z7F0 614 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-217ENST00000541578 MTDHQ86UE4 582 aaKnown RBP5.74□□□□□ -1.49
SNHG1-217ENST00000541578 ZNF761Q86XN6 746 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-217ENST00000541578 RBM12BQ8IXT5 1001 aaKnown RBP5.74□□□□□ -1.49
SNHG1-217ENST00000541578 TTLL11Q8NHH1 800 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 UHMK1Q8TAS1 419 aaKnown RBP5.74□□□□□ -1.49
SNHG1-217ENST00000541578 CXorf38Q8TB03 319 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 ADAMTS17Q8TE56 1095 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 EXOC2Q96KP1 924 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 CLIC6Q96NY7 704 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 TMEM209Q96SK2 561 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 ADAM7Q9H2U9 754 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 KANSL2Q9H9L4 492 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 HSPBP1Q9NZL4 362 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 PLAAQ9Y263 795 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 MRPS23Q9Y3D9 190 aaKnown RBP5.74□□□□□ -1.49
SNHG1-217ENST00000541578 SCRIBQ14160 1630 aa5.74□□□□□ -1.49
SNHG1-217ENST00000541578 B8ZZF3 427 aa5.73□□□□□ -1.49
SNHG1-217ENST00000541578 DDX3XO00571 662 aaKnown RBP eCLIP5.73□□□□□ -1.49
SNHG1-217ENST00000541578 NKRFO15226 690 aaKnown RBP eCLIP5.73□□□□□ -1.49
SNHG1-217ENST00000541578 S100BP04271 92 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-217ENST00000541578 C6orf222P0C671 652 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-217ENST00000541578 SYN1P17600 705 aa5.73□□□□□ -1.49
SNHG1-217ENST00000541578 SQSTM1Q13501 440 aa5.73□□□□□ -1.49
SNHG1-217ENST00000541578 HABP4Q5JVS0 413 aaKnown RBP5.73□□□□□ -1.49
SNHG1-217ENST00000541578 UBXN11Q5T124 520 aa5.73□□□□□ -1.49
SNHG1-217ENST00000541578 PRAMEF18Q5VWM3 479 aa5.73□□□□□ -1.49
SNHG1-217ENST00000541578 DDX1Q92499 740 aaKnown RBP5.73□□□□□ -1.49
SNHG1-217ENST00000541578 PCDHA8Q9Y5H6 950 aa5.73□□□□□ -1.49
SNHG1-217ENST00000541578 ARID4BQ4LE39 1312 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-217ENST00000541578 PRRG2O14669 202 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 CYP7B1O75881 506 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 IL13P35225 146 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 KIAA2012Q0VF49 1180 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 RGL3Q3MIN7 710 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 FAM26FQ5R3K3 315 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 PRR31Q5SQ13 230 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 ZFYVE27Q5T4F4 411 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 MCTP2Q6DN12 878 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 TMC5Q6UXY8 1006 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-217ENST00000541578 PCDH19Q8TAB3 1148 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 FBXW5Q969U6 566 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 CCDC136Q96JN2 1154 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 WRNIP1Q96S55 665 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 PDGFDQ9GZP0 370 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-217ENST00000541578 CATSPERZQ9NTU4 200 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 KLHL42Q9P2K6 505 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 CROTQ9UKG9 612 aa5.72□□□□□ -1.49
SNHG1-217ENST00000541578 WNT9AO14904 365 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 LTFP02788 710 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 APPP05067 770 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 FAHP16930 419 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 MASP1P48740 699 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 EPHA5P54756 1037 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 PAN2Q504Q3 1202 aaKnown RBP5.71□□□□□ -1.5
SNHG1-217ENST00000541578 HSP90AB2PQ58FF8 381 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 ARHGAP36Q6ZRI8 547 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 KCTD1Q719H9 257 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 FAM124AQ86V42 546 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 TXNDC5Q8NBS9 432 aaKnown RBP5.71□□□□□ -1.5
SNHG1-217ENST00000541578 KISS1RQ969F8 398 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-217ENST00000541578 ZSWIM3Q96MP5 696 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms