RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 TATDN2Q93075 761 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 THOC1Q96FV9 657 aaKnown RBP16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 ATP6V0A4Q9HBG4 840 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 NOD2Q9HC29 1040 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 LRRC4BQ9NT99 713 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 MGRN1O60291 552 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 TLR2O60603 784 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 TXNRD1Q16881 649 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 MEI1Q5TIA1 1274 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 CABP7Q86V35 215 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 TANGO6Q9C0B7 1094 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 ISCUQ9H1K1 167 aa16.29■□□□□ 0.2
AC005840.4-201ENST00000541242 FLT1P17948 1338 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 A0A1B0GUA9 196 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 SRRM3A6NNA2 597 aaPredicted RBP16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 F8W031 263 aaPredicted RBP16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 KCNK3O14649 394 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 PPP1R12AO14974 1030 aaPredicted RBP16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 CCNHP51946 323 aaPredicted RBP16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 GRIK5Q16478 980 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 TRAPPC3LQ5T215 181 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 CCDC50Q8IVM0 306 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 RNF10Q8N5U6 811 aaKnown RBP16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 MTMR7Q9Y216 660 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 L3MBTL1Q9Y468 752 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 LY75O60449 1722 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 CCDC194A0A1B0GVG4 234 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 C5orf60A6NFR6 353 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 MYBP10242 640 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 KCNMA1Q12791 1236 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 GKAP1Q5VSY0 366 aaPredicted RBP16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 LRIG3Q6UXM1 1119 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 SEPT12Q8IYM1 358 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 TCP11Q8WWU5 503 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 TBC1D5Q92609 795 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 DDX47Q9H0S4 455 aaKnown RBP16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 RNF14Q9UBS8 474 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 CCDC88AQ3V6T2 1871 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
AC005840.4-201ENST00000541242 SLC8A1P32418 973 aa16.27■□□□□ 0.2
AC005840.4-201ENST00000541242 TNNC1P63316 161 aa16.27■□□□□ 0.2
AC005840.4-201ENST00000541242 MYO1EQ12965 1108 aa16.27■□□□□ 0.2
AC005840.4-201ENST00000541242 LACTB2Q53H82 288 aaPredicted RBP16.27■□□□□ 0.2
AC005840.4-201ENST00000541242 GLIS3Q8NEA6 775 aa16.27■□□□□ 0.2
AC005840.4-201ENST00000541242 MAGEC3Q8TD91 643 aa16.27■□□□□ 0.2
AC005840.4-201ENST00000541242 CRNKL1Q9BZJ0 848 aaKnown RBP16.27■□□□□ 0.2
AC005840.4-201ENST00000541242 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.2
AC005840.4-201ENST00000541242 GRID2IPA4D2P6 1211 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 DDAH1O94760 285 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 CLTAP09496 248 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 CALM1P0DP23 149 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 CALM2P0DP24 149 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 CALM3P0DP25 149 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 DRD4P21917 467 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 NAB2Q15742 525 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 MAN2A1Q16706 1144 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 DYMQ7RTS9 669 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 STAG2Q8N3U4 1231 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 SBF2Q86WG5 1849 aa16.27■□□□□ 0.19
AC005840.4-201ENST00000541242 A0A087X0T9 212 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 BUB1BO60566 1050 aaPredicted RBP16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 FAM228BP0C875 321 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 KIAA0753Q2KHM9 967 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 CCDC47Q96A33 483 aaKnown RBP16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 PCDHA4Q9UN74 947 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 DAPK3O43293 454 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 PPIP5K2O43314 1243 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 CEP104O60308 925 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 MYL1P05976 194 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 USP17L8P0C7I0 530 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 LRRC41Q15345 812 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 KRT71Q3SY84 523 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 CENPPQ6IPU0 288 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 PNMA8AQ86V59 439 aaPredicted RBP16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 TBC1D22AQ8WUA7 517 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 ATP8A2Q9NTI2 1148 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 ADAMTS1Q9UHI8 967 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 PCDHA6Q9UN73 950 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 PCDHA8Q9Y5H6 950 aa16.26■□□□□ 0.19
AC005840.4-201ENST00000541242 ORC4O43929 436 aa16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 DNAJC8O75937 253 aaPredicted RBP16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 GRAPQ13588 217 aa16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 TBC1D1Q86TI0 1168 aaPredicted RBP16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 FMNL3Q8IVF7 1028 aa16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 CUL5Q93034 780 aa16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 TMEM59LQ9UK28 342 aa16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 SSU72P8A0A1W2PR75 194 aa16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 TECP42680 631 aa16.25■□□□□ 0.19
AC005840.4-201ENST00000541242 POLR2FP61218 127 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms