RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SEMA3FQ13275 785 aa30.96■■■□□ 2.55
CHFR-218ENST00000540963 ADHFE1Q8IWW8 467 aa30.96■■■□□ 2.55
CHFR-218ENST00000540963 C11orf84Q9BUA3 381 aaPredicted RBP30.96■■■□□ 2.55
CHFR-218ENST00000540963 UPF3BQ9BZI7 483 aaKnown RBP30.96■■■□□ 2.55
CHFR-218ENST00000540963 ERICH2A1L162 156 aa30.95■■■□□ 2.55
CHFR-218ENST00000540963 CTC1Q2NKJ3 1217 aa30.95■■■□□ 2.55
CHFR-218ENST00000540963 TAF2Q6P1X5 1199 aa30.95■■■□□ 2.55
CHFR-218ENST00000540963 GIMAP8Q8ND71 665 aaPredicted RBP30.95■■■□□ 2.55
CHFR-218ENST00000540963 LMBR1Q8WVP7 490 aa30.95■■■□□ 2.55
CHFR-218ENST00000540963 RBAK-RBAKDNI3L0D1 243 aa30.94■■■□□ 2.54
CHFR-218ENST00000540963 ARHGAP4P98171 946 aa30.94■■■□□ 2.54
CHFR-218ENST00000540963 TROAPQ12815 778 aa30.94■■■□□ 2.54
CHFR-218ENST00000540963 EHMT1Q9H9B1 1298 aa30.94■■■□□ 2.54
CHFR-218ENST00000540963 CLDND1Q9NY35 253 aa30.94■■■□□ 2.54
CHFR-218ENST00000540963 CTNNB1P35222 781 aa30.93■■■□□ 2.54
CHFR-218ENST00000540963 BMPR1AP36894 532 aa30.93■■■□□ 2.54
CHFR-218ENST00000540963 PCNX4Q63HM2 1172 aa30.93■■■□□ 2.54
CHFR-218ENST00000540963 CLP1Q92989 425 aaKnown RBP30.93■■■□□ 2.54
CHFR-218ENST00000540963 UIMC1Q96RL1 719 aa30.93■■■□□ 2.54
CHFR-218ENST00000540963 U3KPZ7 1027 aaPredicted RBP30.93■■■□□ 2.54
CHFR-218ENST00000540963 TTC3P53804 2025 aa30.93■■■□□ 2.54
CHFR-218ENST00000540963 IFIT3O14879 490 aaKnown RBP30.92■■■□□ 2.54
CHFR-218ENST00000540963 CHRNA1P02708 482 aa30.92■■■□□ 2.54
CHFR-218ENST00000540963 LINC00271P0C7V0 271 aa30.92■■■□□ 2.54
CHFR-218ENST00000540963 SART3Q15020 963 aaKnown RBP30.92■■■□□ 2.54
CHFR-218ENST00000540963 EP400NLQ6ZTU2 488 aa30.92■■■□□ 2.54
CHFR-218ENST00000540963 TRIM50Q86XT4 487 aa30.92■■■□□ 2.54
CHFR-218ENST00000540963 POP1Q99575 1024 aaKnown RBP30.92■■■□□ 2.54
CHFR-218ENST00000540963 RC3H2Q9HBD1 1191 aaKnown RBP30.92■■■□□ 2.54
CHFR-218ENST00000540963 RTEL1Q9NZ71 1219 aa30.92■■■□□ 2.54
CHFR-218ENST00000540963 ADGRA3Q8IWK6 1321 aa30.92■■■□□ 2.54
CHFR-218ENST00000540963 PIK3CDO00329 1044 aa30.91■■■□□ 2.54
CHFR-218ENST00000540963 LTBRP36941 435 aa30.91■■■□□ 2.54
CHFR-218ENST00000540963 RPLP2P05387 115 aaKnown RBP30.9■■■□□ 2.54
CHFR-218ENST00000540963 WTAPQ15007 396 aa30.9■■■□□ 2.54
CHFR-218ENST00000540963 SMAD2Q15796 467 aaKnown RBP30.9■■■□□ 2.54
CHFR-218ENST00000540963 UTP14CQ5TAP6 766 aaKnown RBP30.9■■■□□ 2.54
CHFR-218ENST00000540963 RSPH3Q86UC2 560 aa30.9■■■□□ 2.54
CHFR-218ENST00000540963 NLRX1Q86UT6 975 aa30.9■■■□□ 2.54
CHFR-218ENST00000540963 ALYREFQ86V81 257 aaKnown RBP30.9■■■□□ 2.54
CHFR-218ENST00000540963 CUL5Q93034 780 aa30.9■■■□□ 2.54
CHFR-218ENST00000540963 PLVAPQ9BX97 442 aa30.9■■■□□ 2.54
CHFR-218ENST00000540963 IL25Q9H293 177 aa30.9■■■□□ 2.54
CHFR-218ENST00000540963 MAP3K14Q99558 947 aa30.89■■■□□ 2.54
CHFR-218ENST00000540963 IGHDP01880 384 aa30.88■■■□□ 2.53
CHFR-218ENST00000540963 CYP21A2P08686 494 aa30.88■■■□□ 2.53
CHFR-218ENST00000540963 SMARCA1P28370 1054 aa30.88■■■□□ 2.53
CHFR-218ENST00000540963 MGAT3Q09327 533 aa30.88■■■□□ 2.53
CHFR-218ENST00000540963 CATIPQ7Z7H3 387 aa30.88■■■□□ 2.53
CHFR-218ENST00000540963 SMARCC2Q8TAQ2 1214 aa30.88■■■□□ 2.53
CHFR-218ENST00000540963 ZNF689Q96CS4 500 aaPredicted RBP30.88■■■□□ 2.53
CHFR-218ENST00000540963 CDHR1Q96JP9 859 aa30.88■■■□□ 2.53
CHFR-218ENST00000540963 ENPP3O14638 875 aa30.87■■■□□ 2.53
CHFR-218ENST00000540963 GRM6O15303 877 aa30.87■■■□□ 2.53
CHFR-218ENST00000540963 GHRP10912 638 aa30.87■■■□□ 2.53
CHFR-218ENST00000540963 HYAL1Q12794 435 aa30.87■■■□□ 2.53
CHFR-218ENST00000540963 LPIN1Q14693 890 aa30.87■■■□□ 2.53
CHFR-218ENST00000540963 RALYLQ86SE5 291 aaKnown RBP30.87■■■□□ 2.53
CHFR-218ENST00000540963 NCOA7Q8NI08 942 aa30.87■■■□□ 2.53
CHFR-218ENST00000540963 GPRASP2Q96D09 838 aa30.87■■■□□ 2.53
CHFR-218ENST00000540963 SPZ1Q9BXG8 430 aa30.87■■■□□ 2.53
CHFR-218ENST00000540963 MBLAC1A4D2B0 266 aaPredicted RBP30.86■■■□□ 2.53
CHFR-218ENST00000540963 MMP1P03956 469 aa30.86■■■□□ 2.53
CHFR-218ENST00000540963 IRS1P35568 1242 aa30.86■■■□□ 2.53
CHFR-218ENST00000540963 TCF7P36402 384 aaPredicted RBP30.86■■■□□ 2.53
CHFR-218ENST00000540963 SENP2Q9HC62 589 aa30.86■■■□□ 2.53
CHFR-218ENST00000540963 ERAP1Q9NZ08 941 aa30.86■■■□□ 2.53
CHFR-218ENST00000540963 ZNF318Q5VUA4 2279 aa30.86■■■□□ 2.53
CHFR-218ENST00000540963 C5orf42Q9H799 3197 aa30.86■■■□□ 2.53
CHFR-218ENST00000540963 MEIS2O14770 477 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 MBTPS2O43462 519 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 PPFIA1Q13136 1202 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 NAALADL2Q58DX5 795 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 RUFY2Q8WXA3 655 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 SEPT1Q8WYJ6 367 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 P2RX5Q93086 422 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 RRP36Q96EU6 259 aaKnown RBP30.85■■■□□ 2.53
CHFR-218ENST00000540963 TUBE1Q9UJT0 475 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 TELO2Q9Y4R8 837 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 SQORQ9Y6N5 450 aa30.85■■■□□ 2.53
CHFR-218ENST00000540963 DGKIO75912 1065 aa30.84■■■□□ 2.53
CHFR-218ENST00000540963 SP4Q02446 784 aa30.84■■■□□ 2.53
CHFR-218ENST00000540963 SMAD4Q13485 552 aaKnown RBP30.84■■■□□ 2.53
CHFR-218ENST00000540963 BTG3Q14201 252 aaPredicted RBP30.84■■■□□ 2.53
CHFR-218ENST00000540963 HERC4Q5GLZ8 1057 aaPredicted RBP30.84■■■□□ 2.53
CHFR-218ENST00000540963 FBXO47Q5MNV8 452 aa30.84■■■□□ 2.53
CHFR-218ENST00000540963 USP17L6PQ6QN14 398 aa30.84■■■□□ 2.53
CHFR-218ENST00000540963 RUFY4Q6ZNE9 571 aa30.84■■■□□ 2.53
CHFR-218ENST00000540963 TSHZ1Q6ZSZ6 1077 aa30.84■■■□□ 2.53
CHFR-218ENST00000540963 KIF5BP33176 963 aa30.83■■■□□ 2.53
CHFR-218ENST00000540963 NHLH1Q02575 133 aa30.83■■■□□ 2.53
CHFR-218ENST00000540963 PPP2R3CQ969Q6 453 aa30.83■■■□□ 2.53
CHFR-218ENST00000540963 E7EWF7 191 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 KCNA2P16389 499 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 MRE11P49959 708 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 DLX2Q07687 328 aaPredicted RBP30.82■■■□□ 2.52
CHFR-218ENST00000540963 GRIK4Q16099 956 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 EXOC6Q8TAG9 804 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 IGDCC4Q8TDY8 1250 aa30.82■■■□□ 2.52
CHFR-218ENST00000540963 MFSD14AQ96MC6 490 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms