RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 DHX38Q92620 1227 aaKnown RBP19.21■□□□□ 0.67
CD9-209ENST00000540891 VWCEQ96DN2 955 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 UIMC1Q96RL1 719 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 PCYT2Q99447 389 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 SDF4Q9BRK5 362 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 SLC9A2Q9UBY0 812 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 CCNE2O96020 404 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 SMIM10L2AP0DMW4 78 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 SMIM10L2BP0DMW5 78 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 XBP1P17861 261 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 SETQ01105 290 aaPredicted RBP19.2■□□□□ 0.66
CD9-209ENST00000540891 LRIT3Q3SXY7 679 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 PRR16Q569H4 304 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 TMEM199Q8N511 208 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 WNT8BQ93098 351 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 ZSCAN31Q96LW9 406 aaPredicted RBP19.2■□□□□ 0.66
CD9-209ENST00000540891 BACH2Q9BYV9 841 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 RNPEPQ9H4A4 650 aa19.2■□□□□ 0.66
CD9-209ENST00000540891 DDX39AO00148 427 aaKnown RBP19.19■□□□□ 0.66
CD9-209ENST00000540891 IPO5O00410 1097 aaKnown RBP19.19■□□□□ 0.66
CD9-209ENST00000540891 LGR5O75473 907 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 ATG7O95352 703 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 CD2BP2O95400 341 aaKnown RBP19.19■□□□□ 0.66
CD9-209ENST00000540891 TDP2O95551 362 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 ACTR2P61160 394 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 PPIGQ13427 754 aaKnown RBP eCLIP19.19■□□□□ 0.66
CD9-209ENST00000540891 EARS2Q5JPH6 523 aaKnown RBP19.19■□□□□ 0.66
CD9-209ENST00000540891 KRT25Q7Z3Z0 450 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 SCLYQ96I15 445 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 ZNF577Q9BSK1 485 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 ZNF215Q9UL58 517 aaPredicted RBP19.19■□□□□ 0.66
CD9-209ENST00000540891 NOD1Q9Y239 953 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 EMSYQ7Z589 1322 aa19.19■□□□□ 0.66
CD9-209ENST00000540891 PITPNM1O00562 1244 aa19.18■□□□□ 0.66
CD9-209ENST00000540891 ACRP10323 421 aa19.18■□□□□ 0.66
CD9-209ENST00000540891 RBL2Q08999 1139 aa19.18■□□□□ 0.66
CD9-209ENST00000540891 NONOQ15233 471 aaKnown RBP eCLIP19.18■□□□□ 0.66
CD9-209ENST00000540891 INF2Q27J81 1249 aa19.18■□□□□ 0.66
CD9-209ENST00000540891 TRIM71Q2Q1W2 868 aaKnown RBP19.18■□□□□ 0.66
CD9-209ENST00000540891 TNFRSF25Q93038 417 aa19.18■□□□□ 0.66
CD9-209ENST00000540891 MBOAT7Q96N66 472 aa19.18■□□□□ 0.66
CD9-209ENST00000540891 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.18■□□□□ 0.66
CD9-209ENST00000540891 LLPHQ9BRT6 129 aaKnown RBP19.18■□□□□ 0.66
CD9-209ENST00000540891 SH2B1Q9NRF2 756 aaPredicted RBP19.18■□□□□ 0.66
CD9-209ENST00000540891 CYP3A7-CYP3A51PA0A087WV96 503 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 IGKV6D-21A0A0A0MT36 114 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 C17orf102A2RUQ5 167 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 MSH4O15457 936 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 CYP3A7P24462 503 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 FOSBP53539 338 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 ADAM17P78536 824 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 NR5A1Q13285 461 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 PTK7Q13308 1070 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 Q4G0T1 1027 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 TMEM240Q5SV17 173 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 LRCH3Q96II8 777 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 SMARCAD1Q9H4L7 1026 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 IL23AQ9NPF7 189 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 TBC1D22BQ9NU19 505 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 SETD4Q9NVD3 440 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 ERAP1Q9NZ08 941 aa19.17■□□□□ 0.66
CD9-209ENST00000540891 FAM205CA6NFA0 338 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 RBAK-RBAKDNI3L0D1 243 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 TREHO43280 583 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 ST18O60284 1047 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 MMP1P03956 469 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 IQCF3P0C7M6 154 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 MARK3P27448 753 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 BFSP2Q13515 415 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 GPNMBQ14956 572 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 KRT40Q6A162 431 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 TRAF7Q6Q0C0 670 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 MOXD1Q6UVY6 613 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 ABHD15Q6UXT9 468 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 PIK3AP1Q6ZUJ8 805 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 SERINC5Q86VE9 423 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 CAGE1Q8TC20 777 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 GLG1Q92896 1179 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 TANC1Q9C0D5 1861 aa19.16■□□□□ 0.66
CD9-209ENST00000540891 CCDC194A0A1B0GVG4 234 aa19.15■□□□□ 0.66
CD9-209ENST00000540891 KRT2P35908 639 aa19.15■□□□□ 0.66
CD9-209ENST00000540891 ZNF365Q70YC5 407 aa19.15■□□□□ 0.66
CD9-209ENST00000540891 LMBR1Q8WVP7 490 aa19.15■□□□□ 0.66
CD9-209ENST00000540891 SLC5A5Q92911 643 aa19.15■□□□□ 0.66
CD9-209ENST00000540891 ATP6V0A1Q93050 837 aa19.15■□□□□ 0.66
CD9-209ENST00000540891 GJA10Q969M2 543 aa19.15■□□□□ 0.66
CD9-209ENST00000540891 TRIP12Q14669 1992 aaPredicted RBP19.15■□□□□ 0.66
CD9-209ENST00000540891 BTBD18B2RXH4 712 aa19.14■□□□□ 0.65
CD9-209ENST00000540891 SLC37A4O43826 429 aa19.14■□□□□ 0.65
CD9-209ENST00000540891 CKBP12277 381 aa19.14■□□□□ 0.65
CD9-209ENST00000540891 STAT5BP51692 787 aa19.14■□□□□ 0.65
CD9-209ENST00000540891 LETM2Q2VYF4 491 aa19.14■□□□□ 0.65
CD9-209ENST00000540891 RASIP1Q5U651 963 aa19.14■□□□□ 0.65
CD9-209ENST00000540891 ZNF746Q6NUN9 644 aaPredicted RBP19.14■□□□□ 0.65
CD9-209ENST00000540891 PSRC1Q6PGN9 363 aaPredicted RBP19.14■□□□□ 0.65
CD9-209ENST00000540891 PLPPR4Q7Z2D5 763 aa19.14■□□□□ 0.65
CD9-209ENST00000540891 NEK8Q86SG6 692 aa19.14■□□□□ 0.65
CD9-209ENST00000540891 CCDC60Q8IWA6 550 aaPredicted RBP19.14■□□□□ 0.65
CD9-209ENST00000540891 DIS3L2Q8IYB7 885 aaKnown RBP19.14■□□□□ 0.65
CD9-209ENST00000540891 RETREG2Q8NC44 543 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms