RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 NLRP14Q86W24 1093 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 IRF2BP1Q8IU81 584 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 LCORLQ8N3X6 602 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 CEP120Q8N960 986 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 C3orf20Q8ND61 904 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 CCDC42Q96M95 316 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 OSBPL9Q96SU4 736 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 PHF20Q9BVI0 1012 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 DUSP10Q9Y6W6 482 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 SNED1Q8TER0 1413 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 KLRG2A4D1S0 409 aaPredicted RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 FGRP09769 529 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 CNGA1P29973 690 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 MCM7P33993 719 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 PAK2Q13177 524 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 LETM2Q2VYF4 491 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 TBC1D25Q3MII6 688 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 CCDC121Q6ZUS5 278 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 IFT20Q8IY31 132 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 CCDC13Q8IYE1 715 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 ADSSL1Q8N142 457 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 MYCBPAPQ8TBZ2 947 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 TBC1D22AQ8WUA7 517 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 TSG101Q99816 390 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 MTA3Q9BTC8 594 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 SH2D4AQ9H788 454 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 ACTR5Q9H9F9 607 aaPredicted RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 AGPAT5Q9NUQ2 364 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 GGA2Q9UJY4 613 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 CAPN6Q9Y6Q1 641 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 GREB1LQ9C091 1923 aaPredicted RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 WNT7AO00755 349 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 PSMA7O14818 248 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 MOCS3O95396 460 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 KRT14P02533 472 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 FAM163BP0C2L3 166 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 STAT6P42226 847 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 SLC1A4P43007 532 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 HDLBPQ00341 1268 aaKnown RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 TMEM62Q0P6H9 643 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 GRIK3Q13003 919 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 SEPT7Q16181 437 aaKnown RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 GLE1Q53GS7 698 aaKnown RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 NFRKBQ6P4R8 1299 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 ZNF354CQ86Y25 554 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 CCDC114Q96M63 670 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 PSMB7Q99436 277 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 FAM167BQ9BTA0 163 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 IFIH1Q9BYX4 1025 aaKnown RBP5.73□□□□□ -1.49
PROM1-220ENST00000540805 TTYH3Q9C0H2 523 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 DBNDD1Q9H9R9 158 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 MLXIPQ9HAP2 919 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 SLC40A1Q9NP59 571 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 ETAA1Q9NY74 926 aa5.73□□□□□ -1.49
PROM1-220ENST00000540805 E7EVH7 732 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 RASSF9O75901 435 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CFBP00751 764 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 DESP17661 470 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 ASIC1P78348 528 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CDK17Q00537 523 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CETN1Q12798 172 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 PPP2R5BQ15173 497 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 SNCBQ16143 134 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 GRIK5Q16478 980 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 FAM47CQ5HY64 1035 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 FAM47AQ5JRC9 791 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CCDC26Q8TAB7 109 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 TAF4BQ92750 862 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 STAMBPL1Q96FJ0 436 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CCT8L2Q96SF2 557 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 MPHOSPH6Q99547 160 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 MTRQ99707 1265 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 TUBGCP2Q9BSJ2 902 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 PIDD1Q9HB75 910 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 USP40Q9NVE5 1235 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 EHD2Q9NZN4 543 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 TPX2Q9ULW0 747 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 GOLGA4Q13439 2230 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 GSTTP1A0A1W2PQM5 241 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 SRRM3A6NNA2 597 aaPredicted RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 HMGB1P1B2RPK0 211 aaPredicted RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 DNM1LO00429 736 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 FAM107AO95990 144 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 GYS1P13807 737 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CTNNA2P26232 953 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 MDH1P40925 334 aaKnown RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 GNAQP50148 359 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 NFIXQ14938 502 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 AP1ARQ63HQ0 302 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CCDC50Q8IVM0 306 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 FAM114A1Q8IWE2 563 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CD302Q8IX05 232 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 ARFGAP2Q8N6H7 521 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 CCDC155Q8N6L0 562 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 LMBR1Q8WVP7 490 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 ATP6V1G3Q96LB4 118 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 PLCD4Q9BRC7 762 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 TMOD4Q9NZQ9 345 aa5.72□□□□□ -1.49
PROM1-220ENST00000540805 V9GY48 417 aaPredicted RBP5.72□□□□□ -1.49
PROM1-220ENST00000540805 GOLGA6L10A6NI86 522 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms