RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 ZBTB10Q96DT7 871 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 YME1L1Q96TA2 773 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 SPZ1Q9BXG8 430 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 PKD2L1Q9P0L9 805 aa16.42■□□□□ 0.22
SEMA4D-222ENST00000540183 STAM2O75886 525 aa16.41■□□□□ 0.22
SEMA4D-222ENST00000540183 CHRNA1P02708 482 aa16.41■□□□□ 0.22
SEMA4D-222ENST00000540183 GPM6BQ13491 265 aa16.41■□□□□ 0.22
SEMA4D-222ENST00000540183 UBE2SQ16763 222 aa16.41■□□□□ 0.22
SEMA4D-222ENST00000540183 LEXMQ3ZCV2 418 aa16.41■□□□□ 0.22
SEMA4D-222ENST00000540183 MRPL38Q96DV4 380 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-222ENST00000540183 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-222ENST00000540183 EVPLQ92817 2033 aa16.41■□□□□ 0.22
SEMA4D-222ENST00000540183 H3BQ06 376 aaPredicted RBP16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 PRC1O43663 620 aa16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 CAND2O75155 1236 aa16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 GHRP10912 638 aa16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 TCF7P36402 384 aaPredicted RBP16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 TCEAL5Q5H9L2 206 aa16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 FAM26DQ5JW98 314 aa16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 TMEM192Q8IY95 271 aa16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 CUL5Q93034 780 aa16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 FAM122AQ96E09 287 aa16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 IFIH1Q9BYX4 1025 aaKnown RBP16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 ZNF215Q9UL58 517 aaPredicted RBP16.4■□□□□ 0.22
SEMA4D-222ENST00000540183 WDR81Q562E7 1941 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 GSTTP1A0A1W2PQM5 241 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 H3BNC9 293 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 PIK3CDO00329 1044 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 SH2B2O14492 632 aaPredicted RBP16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 DDAH1O94760 285 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 GNAT1P11488 350 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 KCNA2P16389 499 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 ITGB5P18084 799 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 MARK3P27448 753 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 MGAT3Q09327 533 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 TMEM31Q5JXX7 168 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 PTCRAQ6ISU1 281 aaPredicted RBP16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 FAM178BQ8IXR5 827 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 PLXNA4Q9HCM2 1894 aa16.39■□□□□ 0.21
SEMA4D-222ENST00000540183 LPIN1Q14693 890 aa16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 EP400NLQ6ZTU2 488 aa16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 NLRX1Q86UT6 975 aa16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 CCDC82Q8N4S0 544 aa16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 BANK1Q8NDB2 785 aa16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 MAP3K14Q99558 947 aa16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 SEC63Q9UGP8 760 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-222ENST00000540183 PI4K2BG5E9Z4 385 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 CSPG5O95196 566 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 LINC00271P0C7V0 271 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 KIF5BP33176 963 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 PPFIA1Q13136 1202 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 GRIK4Q16099 956 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 MARCH8Q5T0T0 291 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 NEK9Q8TD19 979 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 DNAJB3Q8WWF6 145 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 GPRASP2Q96D09 838 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 SAMD11Q96NU1 681 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 LSG1Q9H089 658 aaKnown RBP16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 PSTPIP2Q9H939 334 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 EHMT1Q9H9B1 1298 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 NRCAMQ92823 1304 aa16.37■□□□□ 0.21
SEMA4D-222ENST00000540183 GRXCR2A6NFK2 248 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 CTNNB1P35222 781 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 IGBP1P78318 339 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 PTPROQ16827 1216 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 TIGD5Q53EQ6 642 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 XRRA1Q6P2D8 792 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 GJD3Q8N144 294 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 LINC01599Q8WXQ3 324 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 APBB2Q92870 758 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 IL17RAQ96F46 866 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 CDY2AQ9Y6F7 541 aa16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 MYH9P35579 1960 aaKnown RBP16.36■□□□□ 0.21
SEMA4D-222ENST00000540183 FNDC1Q4ZHG4 1894 aaPredicted RBP16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 ENPP3O14638 875 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 SLC27A2O14975 620 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 GRM6O15303 877 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 GPR37L1O60883 481 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 SMARCA1P28370 1054 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 SSTR3P32745 418 aaPredicted RBP16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 MCM5P33992 734 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 FBXO47Q5MNV8 452 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 FIBCD1Q8N539 461 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 SEPT1Q8WYJ6 367 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 GLG1Q92896 1179 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 PCYT2Q99447 389 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 LZTS2Q9BRK4 669 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 NSUN3Q9H649 340 aaKnown RBP16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 RC3H2Q9HBD1 1191 aaKnown RBP16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 TUBE1Q9UJT0 475 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 PCDHA6Q9UN73 950 aa16.35■□□□□ 0.21
SEMA4D-222ENST00000540183 PCDHA8Q9Y5H6 950 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms