RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 SENP7Q9BQF6 1050 aa18.1■□□□□ 0.49
TRAF3-204ENST00000539721 JPH1Q9HDC5 661 aaPredicted RBP18.1■□□□□ 0.49
TRAF3-204ENST00000539721 RGL1Q9NZL6 768 aa18.1■□□□□ 0.49
TRAF3-204ENST00000539721 SLC9A2Q9UBY0 812 aa18.1■□□□□ 0.49
TRAF3-204ENST00000539721 POTEFA5A3E0 1075 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 WDR64B1ANS9 1081 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 UBA1P22314 1058 aaKnown RBP18.09■□□□□ 0.49
TRAF3-204ENST00000539721 SFNP31947 248 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 RGS2P41220 211 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 CTTNQ14247 550 aaKnown RBP18.09■□□□□ 0.49
TRAF3-204ENST00000539721 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 KCNK18Q7Z418 384 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 GIMAP8Q8ND71 665 aaPredicted RBP18.09■□□□□ 0.49
TRAF3-204ENST00000539721 NEK9Q8TD19 979 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 LARP4BQ92615 738 aaKnown RBP18.09■□□□□ 0.49
TRAF3-204ENST00000539721 RAD54LQ92698 747 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 HSD17B14Q9BPX1 270 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 CFHR5Q9BXR6 569 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 VTA1Q9NP79 307 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 BLOC1S4Q9NUP1 217 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.09■□□□□ 0.49
TRAF3-204ENST00000539721 SORBS3O60504 671 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 CCNE2O96020 404 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 HOXC6P09630 235 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 CCDC192P0DO97 292 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 CTGFP29279 349 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 PSMC4P43686 418 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 LACTBP83111 547 aaPredicted RBP18.09■□□□□ 0.49
TRAF3-204ENST00000539721 NEDD9Q14511 834 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 MCM6Q14566 821 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 SV2BQ7L1I2 683 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 CYFIP1Q7L576 1253 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 TPH2Q8IWU9 490 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 USP6NLQ92738 828 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 TINF2Q9BSI4 451 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 FUCA2Q9BTY2 467 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 TSPY26PQ9H489 355 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 BCAS3Q9H6U6 928 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 KBTBD4Q9NVX7 518 aa18.09■□□□□ 0.49
TRAF3-204ENST00000539721 SYNGAP1Q96PV0 1343 aa18.08■□□□□ 0.49
TRAF3-204ENST00000539721 E9PMD0 336 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 GTPBP6O43824 516 aaPredicted RBP18.08■□□□□ 0.48
TRAF3-204ENST00000539721 SLITRK3O94933 977 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 SMC2O95347 1197 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 CYP2B6P20813 491 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 CASP1P29466 404 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 SP4Q02446 784 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 TYRO3Q06418 890 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
TRAF3-204ENST00000539721 LY6KQ17RY6 165 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 SMAP1Q8IYB5 467 aaPredicted RBP18.08■□□□□ 0.48
TRAF3-204ENST00000539721 MSL3Q8N5Y2 521 aaKnown RBP18.08■□□□□ 0.48
TRAF3-204ENST00000539721 BANK1Q8NDB2 785 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 RDM1Q8NG50 284 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 SMARCE1Q969G3 411 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 MTRQ99707 1265 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 ARHGAP39Q9C0H5 1083 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.48
TRAF3-204ENST00000539721 GJD2Q9UKL4 321 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 PCDHA5Q9Y5H7 936 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 WDR81Q562E7 1941 aa18.08■□□□□ 0.48
TRAF3-204ENST00000539721 LOXHD1Q8IVV2 1947 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 ARIH2O95376 493 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 SNAI1O95863 264 aaPredicted RBP18.07■□□□□ 0.48
TRAF3-204ENST00000539721 P4HBP07237 508 aaKnown RBP18.07■□□□□ 0.48
TRAF3-204ENST00000539721 MUTP22033 750 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 AMPD3Q01432 767 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 SP3Q02447 781 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 DPYDQ12882 1025 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 TTLL4Q14679 1199 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 GSE1Q14687 1217 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 KIF22Q14807 665 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 KCTD17Q8N5Z5 321 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 TRIM47Q96LD4 638 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 APBA2Q99767 749 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 LXNQ9BS40 222 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 BLZF1Q9H2G9 400 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 PDGFCQ9NRA1 345 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 TUBE1Q9UJT0 475 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 DNM3Q9UQ16 869 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 PCDHA10Q9Y5I2 948 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 GGPS1O95749 300 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 CUL4BQ13620 913 aa18.07■□□□□ 0.48
TRAF3-204ENST00000539721 A0A087WWV3 80 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 BIN1O00499 593 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 FARP2O94887 1054 aaPredicted RBP18.06■□□□□ 0.48
TRAF3-204ENST00000539721 SSBP05455 408 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRAF3-204ENST00000539721 MYL1P05976 194 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 PLA2G4BP0C869 781 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 TXNP10599 105 aaKnown RBP18.06■□□□□ 0.48
TRAF3-204ENST00000539721 ACTR2P61160 394 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 PSMC6P62333 389 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 STX1AQ16623 288 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 TAPT1Q6NXT6 567 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 GAS2L3Q86XJ1 694 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 LRRC27Q9C0I9 530 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 KATNBL1Q9H079 304 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 ABHD16BQ9H3Z7 469 aa18.06■□□□□ 0.48
TRAF3-204ENST00000539721 MLXIPQ9HAP2 919 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms