RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 DKC1O60832 514 aaKnown RBP eCLIP11.27□□□□□ -0.61
SPARC-209ENST00000539687 STAM2O75886 525 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 IPO7O95373 1038 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 GYPCP04921 128 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 ALAS1P13196 640 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 PTPRAP18433 802 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 ADKP55263 362 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 MARSP56192 900 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 ETF1P62495 437 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 TBC1D8BQ0IIM8 1120 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 VWA3BQ502W6 1294 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 NBPF12Q5TAG4 269 aaPredicted RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 KCNK18Q7Z418 384 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 TXLNBQ8N3L3 684 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 RDM1Q8NG50 284 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 OR8K1Q8NGG5 319 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 ZNF507Q8TCN5 953 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 P2RX7Q99572 595 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 HSD17B14Q9BPX1 270 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 GLIS2Q9BZE0 524 aaPredicted RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 JADE2Q9NQC1 790 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 OLFML3Q9NRN5 406 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 ADARB2Q9NS39 739 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 FBXO28Q9NVF7 368 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 TRMT1Q9NXH9 659 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 ODF2LQ9ULJ1 636 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 CAPN11Q9UMQ6 739 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 PPP2R2CQ9Y2T4 447 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 SHTN1A0MZ66 631 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 HAX1O00165 279 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 IPO5O00410 1097 aaKnown RBP11.26□□□□□ -0.61
SPARC-209ENST00000539687 CETN3O15182 167 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 EIF3DO15371 548 aaKnown RBP eCLIP11.26□□□□□ -0.61
SPARC-209ENST00000539687 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 SPATA31C1P0DKV0 1188 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 TRIM21P19474 475 aaKnown RBP11.26□□□□□ -0.61
SPARC-209ENST00000539687 CASP14P31944 242 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 SFNP31947 248 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 KRT9P35527 623 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 STAT3P40763 770 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 APLP1P51693 650 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 ZBED6P86452 979 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 CDK17Q00537 523 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 SPP2Q13103 211 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 ALCAMQ13740 583 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 TUBB2AQ13885 445 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 COG2Q14746 738 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 ECM1Q16610 540 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 BMT2Q1RMZ1 405 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 RNF207Q6ZRF8 634 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 SLC17A8Q8NDX2 589 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 GOLGA5Q8TBA6 731 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 CLEC4DQ8WXI8 215 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 KLRG1Q96E93 195 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 CDHR1Q96JP9 859 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 PCMTD1Q96MG8 357 aaPredicted RBP11.26□□□□□ -0.61
SPARC-209ENST00000539687 AGBL1Q96MI9 1066 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 TUBB2BQ9BVA1 445 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 HOXC10Q9NYD6 342 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 GGA3Q9NZ52 723 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 MYO1AQ9UBC5 1043 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 UBIAD1Q9Y5Z9 338 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 LOXHD1Q8IVV2 1947 aa11.26□□□□□ -0.61
SPARC-209ENST00000539687 DICER1Q9UPY3 1922 aaKnown RBP11.26□□□□□ -0.61
SPARC-209ENST00000539687 B4DLN1 442 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 VWA5AO00534 786 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 PDXKO00764 312 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
SPARC-209ENST00000539687 FAM13AO94988 1023 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 EGFRP00533 1210 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 CYLC1P35663 651 aaPredicted RBP11.25□□□□□ -0.61
SPARC-209ENST00000539687 JAK3P52333 1124 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 KRT83P78385 493 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 PABPC4Q13310 644 aaKnown RBP eCLIP11.25□□□□□ -0.61
SPARC-209ENST00000539687 GIT2Q14161 759 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 NFIL3Q16649 462 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 CCDC40Q4G0X9 1142 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 ZCWPW2Q504Y3 356 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 SH3D19Q5HYK7 790 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 ZC3H3Q8IXZ2 948 aaKnown RBP11.25□□□□□ -0.61
SPARC-209ENST00000539687 CCDC170Q8IYT3 715 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
SPARC-209ENST00000539687 ZNF592Q92610 1267 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 DCPSQ96C86 337 aaKnown RBP11.25□□□□□ -0.61
SPARC-209ENST00000539687 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 DNAJC7Q99615 494 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 BHMT2Q9H2M3 363 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 NDST4Q9H3R1 872 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 ZSWIM4Q9H7M6 989 aa11.25□□□□□ -0.61
SPARC-209ENST00000539687 METTL14Q9HCE5 456 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms