RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 NEMFO60524 1076 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 GAS7O60861 476 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 ATG7O95352 703 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 TRAPPC10P48553 1259 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 PSEN2P49810 448 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 CHMP4BP1P59074 171 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 RESTQ13127 1097 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 ITGA7Q13683 1181 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 CALCRLQ16602 461 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 FAM20AQ96MK3 541 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 C16orf70Q9BSU1 422 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 HTATIP2Q9BUP3 242 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 TMEM60Q9H2L4 133 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 UNC45AQ9H3U1 944 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 PCDHB6Q9Y5E3 794 aa14.37□□□□□ -0.11
TSPAN9-207ENST00000539631 MYH9P35579 1960 aaKnown RBP14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 MKI67P46013 3256 aaKnown RBP14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 ARVCFO00192 962 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 CHMP2AO43633 222 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 BAG4O95429 457 aaKnown RBP14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 F2P00734 622 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 CDK7P50613 346 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 RTP1P59025 263 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 KRT76Q01546 638 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 MFSD10Q14728 455 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 SNX17Q15036 470 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 NBPF20Q3BBV1 942 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 TRIM60Q495X7 471 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 ZNF746Q6NUN9 644 aaPredicted RBP14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 PCYT2Q99447 389 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 TCEAL9Q9UHQ7 104 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 ATP11BQ9Y2G3 1177 aa14.36□□□□□ -0.11
TSPAN9-207ENST00000539631 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 HAS3O00219 553 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 LGR5O75473 907 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 SUPT20HL2P0C7V6 817 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 TXKP42681 527 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 ORC2Q13416 577 aaPredicted RBP14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 KIAA0753Q2KHM9 967 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 RILPL1Q5EBL4 403 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 C1orf53Q5VUE5 145 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 MIS18BP1Q6P0N0 1132 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 B3GNT9Q6UX72 402 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 SMAP1Q8IYB5 467 aaPredicted RBP14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 SLFN12Q8IYM2 578 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 C4orf32Q8N8J7 132 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 SLC43A3Q8NBI5 491 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 DPF3Q92784 378 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 MTMR9Q96QG7 549 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 KATNAL1Q9BW62 490 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 VAV3Q9UKW4 847 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 EMSYQ7Z589 1322 aa14.35□□□□□ -0.11
TSPAN9-207ENST00000539631 IGKV6D-21A0A0A0MT36 114 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 H3BRB1 525 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 PPP2R5CQ13362 524 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 PKP1Q13835 747 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 FAM47CQ5HY64 1035 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 FOXD4L5Q5VV16 416 aaPredicted RBP14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 SWSAP1Q6NVH7 229 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 MIER3Q7Z3K6 550 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 CCDC60Q8IWA6 550 aaPredicted RBP14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 FOXD4L4Q8WXT5 416 aaPredicted RBP14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 GLG1Q92896 1179 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 SMARCAD1Q9H4L7 1026 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 TUT1Q9H6E5 874 aaKnown RBP14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 DISC1Q9NRI5 854 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 SAMM50Q9Y512 469 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 PCDHA10Q9Y5I2 948 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 KAT6AQ92794 2004 aa14.34□□□□□ -0.11
TSPAN9-207ENST00000539631 WDR64B1ANS9 1081 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 EML1O00423 815 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 BACH1O14867 736 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 PQBP1O60828 265 aaKnown RBP14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 PSAPP07602 524 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 OR52Z1P0C646 297 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 MARK3P27448 753 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 SFNP31947 248 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 STAT5BP51692 787 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 JAK3P52333 1124 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 TLE2Q04725 743 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 NFRKBQ6P4R8 1299 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 C7orf61Q8IZ16 206 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 RNPEPQ9H4A4 650 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 ZSCAN16Q9H4T2 348 aaPredicted RBP14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 AZI2Q9H6S1 392 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 ZNF302Q9NR11 478 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 HDAC6Q9UBN7 1215 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 GABBR1Q9UBS5 961 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 ZNF215Q9UL58 517 aaPredicted RBP14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 PCDHA12Q9UN75 941 aa14.33□□□□□ -0.12
TSPAN9-207ENST00000539631 TNRC18O15417 2968 aaPredicted RBP14.32□□□□□ -0.12
TSPAN9-207ENST00000539631 EVI5O60447 810 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms