RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 FEZ2Q9UHY8 353 aaPredicted RBP6.84□□□□□ -1.32
PDZRN4-203ENST00000539469 ATP6V1DQ9Y5K8 247 aa6.84□□□□□ -1.32
PDZRN4-203ENST00000539469 ZBTB5O15062 677 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 STAT2P52630 851 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 BACE1P56817 501 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 IRX3P78415 501 aaPredicted RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 BRD3Q15059 726 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 ZSCAN16Q9H4T2 348 aaPredicted RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 SH2D4AQ9H788 454 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 SRA1Q9HD15 236 aaKnown RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 LCMT1Q9UIC8 334 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 PNMA6FA0A0J9YX94 578 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 ANKRD65E5RJM6 399 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 PPP1R12BO60237 982 aaPredicted RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 KRT2P35908 639 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 ETFBP38117 255 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 IREB2P48200 963 aaKnown RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 TOB1P50616 345 aaPredicted RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 CLCN6P51797 869 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 KRT85P78386 507 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 IKQ13123 557 aaPredicted RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 ARHGAP29Q52LW3 1261 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 C11orf57Q6ZUT1 292 aaPredicted RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 KIFC2Q96AC6 838 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 OTUD5Q96G74 571 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 EPAS1Q99814 870 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 RPAP3Q9H6T3 665 aaPredicted RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 HOMER2Q9NSB8 354 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 SEC63Q9UGP8 760 aaKnown RBP6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 CLIC4Q9Y696 253 aa6.83□□□□□ -1.32
PDZRN4-203ENST00000539469 BECN2A8MW95 431 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 OPLAHO14841 1288 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 WDR46O15213 610 aaKnown RBP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 DKK1O94907 266 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 NAPAP54920 295 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 NLRP5P59047 1200 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 SERINC3Q13530 473 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 OXLD1Q5BKU9 147 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 TREML2Q5T2D2 321 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 NOSTRINQ8IVI9 506 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 RANBP17Q9H2T7 1088 aaKnown RBP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 FOXP1Q9H334 677 aaPredicted RBP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 AS3MTQ9HBK9 375 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 SH3GLB2Q9NR46 395 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 TMEM260Q9NX78 707 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 SLU7O95391 586 aaKnown RBP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 ITGBL1O95965 494 aaPredicted RBP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 SSBP05455 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 NF2P35240 595 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 PLCB3Q01970 1234 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 USH1GQ495M9 461 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 CST9Q5W186 159 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 CCDC174Q6PII3 467 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 C14orf80Q86SX3 495 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 PLA2G4DQ86XP0 818 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 HNRNPLLQ8WVV9 542 aaKnown RBP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 C12orf42Q96LP6 360 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 CEP89Q96ST8 783 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 P2RX7Q99572 595 aaKnown RBP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 RBCK1Q9BYM8 510 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 NIF3L1Q9GZT8 377 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 ZMYND12Q9H0C1 365 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 PCDHA6Q9UN73 950 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 PCDHA4Q9UN74 947 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 PCDHA8Q9Y5H6 950 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 CSADQ9Y600 493 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 ZNF536O15090 1300 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 NDUFB5O43674 189 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 SEC13P55735 322 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 MOGSQ13724 837 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 UBE2SQ16763 222 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 EML3Q32P44 896 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 POTEEQ6S8J3 1075 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 NUDT18Q6ZVK8 323 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 BRAPQ7Z569 592 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 BLIDQ8IZY5 108 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 DAGLBQ8NCG7 672 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 LEO1Q8WVC0 666 aaPredicted RBP6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 LPAR1Q92633 364 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 SMARCE1Q969G3 411 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 OPTNQ96CV9 577 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 PGBD1Q96JS3 809 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 TRIM55Q9BYV6 548 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 PRKD2Q9BZL6 878 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 FEM1BQ9UK73 627 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 PCDHB9Q9Y5E1 797 aa6.82□□□□□ -1.32
PDZRN4-203ENST00000539469 DYTNA2CJ06 578 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 SMCO2A6NFE2 343 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 PEX10O60683 326 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 PLA2G6O60733 806 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 CELF2O95319 508 aaKnown RBP6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 XBP1P17861 261 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 CYP2C19P33261 490 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 PLEKHG4Q58EX7 1191 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 MEI1Q5TIA1 1274 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 ISM2Q6H9L7 571 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 PIK3AP1Q6ZUJ8 805 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 PAF1Q8N7H5 531 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 ERO1AQ96HE7 468 aa6.81□□□□□ -1.32
PDZRN4-203ENST00000539469 PCDHB6Q9Y5E3 794 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms