RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SLFN14P0C7P3 912 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 KCNA2P16389 499 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 HSPA6P17066 643 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 CDC25AP30304 524 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 SFNP31947 248 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 JAK3P52333 1124 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 HTRA3P83110 453 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 LACTBP83111 547 aaPredicted RBP11.96□□□□□ -0.49
LEMD3-202ENST00000539442 SP3Q02447 781 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 KIF22Q14807 665 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 KARSQ15046 597 aaKnown RBP11.96□□□□□ -0.49
LEMD3-202ENST00000539442 RRAGBQ5VZM2 374 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 CEP57L1Q8IYX8 460 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 PDILTQ8N807 584 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 GIMAP8Q8ND71 665 aaPredicted RBP11.96□□□□□ -0.49
LEMD3-202ENST00000539442 RDM1Q8NG50 284 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 DHX58Q96C10 678 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 CDK5RAP3Q96JB5 506 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 APBA2Q99767 749 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 POLR3CQ9BUI4 534 aaPredicted RBP11.96□□□□□ -0.49
LEMD3-202ENST00000539442 STK17AQ9UEE5 414 aa11.96□□□□□ -0.49
LEMD3-202ENST00000539442 WDR64B1ANS9 1081 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 ACTN4O43707 911 aaKnown RBP11.95□□□□□ -0.5
LEMD3-202ENST00000539442 ATP9AO75110 1047 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 TBC1D8O95759 1140 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 PLCG1P19174 1290 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 RPA1P27694 616 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 CCT6AP40227 531 aaKnown RBP11.95□□□□□ -0.5
LEMD3-202ENST00000539442 STAT6P42226 847 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 PSMC4P43686 418 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 GRB10Q13322 594 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 NEDD9Q14511 834 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 EPHA7Q15375 998 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 ZSCAN23Q3MJ62 389 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 LONRF3Q496Y0 759 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 TMEM119Q4V9L6 283 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 ZNF746Q6NUN9 644 aaPredicted RBP11.95□□□□□ -0.5
LEMD3-202ENST00000539442 RBM43Q6ZSC3 357 aaKnown RBP11.95□□□□□ -0.5
LEMD3-202ENST00000539442 SEPT14Q6ZU15 432 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 NPLOC4Q8TAT6 608 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 TINF2Q9BSI4 451 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 UNC45AQ9H3U1 944 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 TUFT1Q9NNX1 390 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.95□□□□□ -0.5
LEMD3-202ENST00000539442 SERTAD1Q9UHV2 236 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 GJD2Q9UKL4 321 aa11.95□□□□□ -0.5
LEMD3-202ENST00000539442 RBM47A0AV96 593 aaKnown RBP11.94□□□□□ -0.5
LEMD3-202ENST00000539442 EML1O00423 815 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 CHMP2AO43633 222 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 TRPA1O75762 1119 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 XRCC5P13010 732 aaKnown RBP11.94□□□□□ -0.5
LEMD3-202ENST00000539442 UBA1P22314 1058 aaKnown RBP11.94□□□□□ -0.5
LEMD3-202ENST00000539442 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 MIER3Q7Z3K6 550 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 SH3RF1Q7Z6J0 888 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 FBXO16Q8IX29 292 aaPredicted RBP11.94□□□□□ -0.5
LEMD3-202ENST00000539442 SMAP1Q8IYB5 467 aaPredicted RBP11.94□□□□□ -0.5
LEMD3-202ENST00000539442 SCFD2Q8WU76 684 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 PNMA5Q96PV4 448 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 UIMC1Q96RL1 719 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 HSD17B14Q9BPX1 270 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 EIF2AK1Q9BQI3 630 aaKnown RBP11.94□□□□□ -0.5
LEMD3-202ENST00000539442 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 ABHD16BQ9H3Z7 469 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
LEMD3-202ENST00000539442 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
LEMD3-202ENST00000539442 ZNFX1Q9P2E3 1918 aaKnown RBP11.94□□□□□ -0.5
LEMD3-202ENST00000539442 DDX39AO00148 427 aaKnown RBP11.93□□□□□ -0.5
LEMD3-202ENST00000539442 MED24O75448 989 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 SNAI1O95863 264 aaPredicted RBP11.93□□□□□ -0.5
LEMD3-202ENST00000539442 GNRH1P01148 92 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 MYL1P05976 194 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 SPATA31C1P0DKV0 1188 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 CTGFP29279 349 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 ZNF445P59923 1031 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 C1QTNF8P60827 252 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 MAP2K1Q02750 393 aaPredicted RBP11.93□□□□□ -0.5
LEMD3-202ENST00000539442 TTLL4Q14679 1199 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 POSTNQ15063 836 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 ZRSR1Q15695 479 aaKnown RBP11.93□□□□□ -0.5
LEMD3-202ENST00000539442 CAMK4Q16566 473 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 NAALADL2Q58DX5 795 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 CCDC62Q6P9F0 684 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 EEPD1Q7L9B9 569 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 CATSPER3Q86XQ3 398 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 KATNBL1Q9H079 304 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 GZF1Q9H116 711 aaPredicted RBP11.93□□□□□ -0.5
LEMD3-202ENST00000539442 DDX41Q9UJV9 622 aaKnown RBP11.93□□□□□ -0.5
LEMD3-202ENST00000539442 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
LEMD3-202ENST00000539442 SYCE3A1L190 88 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 GPR25O00155 361 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 DKC1O60832 514 aaKnown RBP eCLIP11.92□□□□□ -0.5
LEMD3-202ENST00000539442 FARP2O94887 1054 aaPredicted RBP11.92□□□□□ -0.5
LEMD3-202ENST00000539442 LYPLA2O95372 231 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 CCNE2O96020 404 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 IGHA2P01877 340 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 P4HBP07237 508 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms