RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 NIPA1Q7RTP0 329 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 KRT222Q8N1A0 295 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 C17orf53Q8N3J3 647 aaPredicted RBP9.88□□□□□ -0.83
DDB1-213ENST00000539332 RETREG2Q8NC44 543 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 GPRC5AQ8NFJ5 357 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 CALML4Q96GE6 196 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 C7orf25Q9BPX7 421 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 R3HDMLQ9H3Y0 253 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 VAV3Q9UKW4 847 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 PCDHA12Q9UN75 941 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 PFASO15067 1338 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 MEIS1O00470 390 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 MSH4O15457 936 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 ZMYND10O75800 440 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 TUBB4AP04350 444 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 TM4SF4P48230 202 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 ZNF75DP51815 510 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 CCNA1P78396 465 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 SETQ01105 290 aaPredicted RBP9.88□□□□□ -0.83
DDB1-213ENST00000539332 TAF1CQ15572 869 aaPredicted RBP9.88□□□□□ -0.83
DDB1-213ENST00000539332 PRR16Q569H4 304 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 KRT79Q5XKE5 535 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 ANKRD35Q8N283 1001 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 SHCBP1Q8NEM2 672 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 ZNF397Q8NF99 534 aaPredicted RBP9.88□□□□□ -0.83
DDB1-213ENST00000539332 ENOX1Q8TC92 643 aaKnown RBP9.88□□□□□ -0.83
DDB1-213ENST00000539332 SNX29Q8TEQ0 813 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 MRFAP1L1Q96HT8 127 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 CAPNS2Q96L46 248 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
DDB1-213ENST00000539332 TAAR1Q96RJ0 339 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 MED15Q96RN5 788 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 RMDN3Q96TC7 470 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 TSPYL1Q9H0U9 437 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 PORCNQ9H237 461 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 MROH8Q9H579 483 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 RMND1Q9NWS8 449 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 STK24Q9Y6E0 443 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 ARID2Q68CP9 1835 aa9.88□□□□□ -0.83
DDB1-213ENST00000539332 ADGRA2Q96PE1 1338 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 PSMD10O75832 226 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 RHOBTB3O94955 611 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 RPN1P04843 607 aaKnown RBP9.87□□□□□ -0.83
DDB1-213ENST00000539332 UBXN2AP68543 259 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 FAM110CQ1W6H9 321 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 CEP55Q53EZ4 464 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 COBLL1Q53SF7 1204 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 ISM2Q6H9L7 571 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 B3GNT9Q6UX72 402 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 CYP2W1Q8TAV3 490 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 RAD54LQ92698 747 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 STAMQ92783 540 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 SLC5A5Q92911 643 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 TRIM9Q9C026 710 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 NT5C3AQ9H0P0 336 aa9.87□□□□□ -0.83
DDB1-213ENST00000539332 MYH9P35579 1960 aaKnown RBP9.86□□□□□ -0.83
DDB1-213ENST00000539332 AOC2O75106 756 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 TNNT1P13805 278 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 CD44P16070 742 aaKnown RBP9.86□□□□□ -0.83
DDB1-213ENST00000539332 ZNF18P17022 549 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 SLC20A2Q08357 652 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 ECM1Q16610 540 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 ZNF658Q5TYW1 1059 aaPredicted RBP9.86□□□□□ -0.83
DDB1-213ENST00000539332 PCNX4Q63HM2 1172 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 KCNK18Q7Z418 384 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 RASSF8Q8NHQ8 419 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 IL31RAQ8NI17 732 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 LARP4BQ92615 738 aaKnown RBP9.86□□□□□ -0.83
DDB1-213ENST00000539332 GJA10Q969M2 543 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 BLZF1Q9H2G9 400 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 EFCC1Q9HA90 598 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 PXMP2Q9NR77 195 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 CALCOCO1Q9P1Z2 691 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 CPA4Q9UI42 421 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 MGAMO43451 1857 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 TLR2O60603 784 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 FCER1AP12319 257 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 EIF2AK2P19525 551 aaKnown RBP9.86□□□□□ -0.83
DDB1-213ENST00000539332 PTGS1P23219 599 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 RPA1P27694 616 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 ZNF76P36508 570 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 AMPD3Q01432 767 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 CNTN2Q02246 1040 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 EHHADHQ08426 723 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 CRHR2Q13324 411 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 PPP2R5CQ13362 524 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 KCTD2Q14681 263 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 PGM5Q15124 567 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 WDR78Q5VTH9 848 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 ARHGEF16Q5VV41 709 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 HAUS3Q68CZ6 603 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 DNERQ8NFT8 737 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 KIF18AQ8NI77 898 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 NSUN6Q8TEA1 469 aaKnown RBP9.86□□□□□ -0.83
DDB1-213ENST00000539332 MXRA8Q9BRK3 442 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 PDCD2LQ9BRP1 358 aa9.86□□□□□ -0.83
DDB1-213ENST00000539332 POLR3CQ9BUI4 534 aaPredicted RBP9.86□□□□□ -0.83
DDB1-213ENST00000539332 KCND1Q9NSA2 647 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms