RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CCDC84Q86UT8 332 aaPredicted RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 NOSTRINQ8IVI9 506 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 TMEM199Q8N511 208 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 C7orf31Q8N865 590 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 CNNM3Q8NE01 707 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 MCPH1Q8NEM0 835 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 KCNV2Q8TDN2 545 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 U2AF1L4Q8WU68 220 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 CLEC4DQ8WXI8 215 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 SYAP1Q96A49 352 aaPredicted RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 JPH1Q9HDC5 661 aaPredicted RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 TUFT1Q9NNX1 390 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 ANKEF1Q9NU02 776 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 DDX25Q9UHL0 483 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 SCAF8Q9UPN6 1271 aaKnown RBP4.01□□□□□ -1.77
PTPN22-211ENST00000538253 NUB1Q9Y5A7 615 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 PCDHA10Q9Y5I2 948 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 TACC3Q9Y6A5 838 aa4.01□□□□□ -1.77
PTPN22-211ENST00000538253 KIF28PB7ZC32 967 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 KIF4AO95239 1232 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 PLEKHA8P1O95397 391 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 YEATS4O95619 227 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 OR52Z1P0C646 297 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 C6orf222P0C671 652 aaPredicted RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 TRIM21P19474 475 aaKnown RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 EIF2AK2P19525 551 aaKnown RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 ADD1P35611 737 aaKnown RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 LONP1P36776 959 aaKnown RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 NFKBIBQ15653 356 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 XKR3Q5GH77 459 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 TTC38Q5R3I4 469 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 LRCH2Q5VUJ6 765 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 SMYD5Q6GMV2 418 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 PSRC1Q6PGN9 363 aaPredicted RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC73Q6ZRK6 1079 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 CHST3Q7LGC8 479 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 SESTD1Q86VW0 696 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 CKAP2LQ8IYA6 745 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 PHIPQ8WWQ0 1821 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 GLG1Q92896 1179 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC51Q96ER9 411 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 SPATA33Q96N06 139 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 NACC1Q96RE7 527 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 PHF20Q9BVI0 1012 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 C2orf40Q9H1Z8 148 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 PORCNQ9H237 461 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 KDM4CQ9H3R0 1056 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 ZSWIM4Q9H7M6 989 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 CHMP5Q9NZZ3 219 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 ZNF536O15090 1300 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 NRCAMQ92823 1304 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 VPS37CA5D8V6 355 aaPredicted RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC85CA6NKD9 419 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 MEIS1O00470 390 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 P4HBP07237 508 aaKnown RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 MYL3P08590 195 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 GJB2P29033 226 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 UBA7P41226 1012 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 PSMC5P62195 406 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 SCRN1Q12765 414 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 DNAJC21Q5F1R6 531 aaKnown RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 GNASQ5JWF2 1037 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 CELF3Q5SZQ8 465 aaKnown RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 IER5Q5VY09 327 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 SEPT14Q6ZU15 432 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 USP37Q86T82 979 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC144CPQ8IYA2 1237 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 STAG2Q8N3U4 1231 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 IFT74Q96LB3 600 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 LRRC2Q9BYS8 371 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 CRISPLD2Q9H0B8 497 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 C17orf75Q9HAS0 396 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 PAK6Q9NQU5 681 aaPredicted RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 STK17AQ9UEE5 414 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 RWDD3Q9Y3V2 267 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 SAMM50Q9Y512 469 aa4□□□□□ -1.77
PTPN22-211ENST00000538253 GREB1LQ9C091 1923 aaPredicted RBP4□□□□□ -1.77
PTPN22-211ENST00000538253 A6NJR5 290 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 DYNC1LI2O43237 492 aaPredicted RBP3.99□□□□□ -1.77
PTPN22-211ENST00000538253 STX6O43752 255 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 GGPS1O95749 300 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 MLLT1Q03111 559 aaPredicted RBP3.99□□□□□ -1.77
PTPN22-211ENST00000538253 NTRK3Q16288 839 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 JAKMIP3Q5VZ66 844 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 ZBTB8OSQ8IWT0 167 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC82Q8N4S0 544 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 AFAP1L1Q8TED9 768 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 NCAPGQ9BPX3 1015 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 FTHL17Q9BXU8 183 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 TXNRD2Q9NNW7 524 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 TPCN1Q9ULQ1 816 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 PCDHA12Q9UN75 941 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 EXOC7Q9UPT5 735 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 C17orf102A2RUQ5 167 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 C19orf67A6NJJ6 358 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 ESPNB1AK53 854 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 IPO5O00410 1097 aaKnown RBP3.99□□□□□ -1.77
PTPN22-211ENST00000538253 NFIBO00712 420 aa3.99□□□□□ -1.77
PTPN22-211ENST00000538253 KIAA0391O15091 583 aaKnown RBP3.99□□□□□ -1.77
PTPN22-211ENST00000538253 EVI5O60447 810 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms