RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 RNPEPQ9H4A4 650 aa17.07■□□□□ 0.32
LRRK1-211ENST00000538064 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
LRRK1-211ENST00000538064 ABHD14A-ACY1A0A1B0GW23 586 aa17.06■□□□□ 0.32
LRRK1-211ENST00000538064 EPB41L2O43491 1005 aaKnown RBP17.06■□□□□ 0.32
LRRK1-211ENST00000538064 EFCAB14O75071 495 aa17.06■□□□□ 0.32
LRRK1-211ENST00000538064 FOSP01100 380 aaPredicted RBP17.06■□□□□ 0.32
LRRK1-211ENST00000538064 GNAT1P11488 350 aa17.06■□□□□ 0.32
LRRK1-211ENST00000538064 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
LRRK1-211ENST00000538064 TCF7P36402 384 aaPredicted RBP17.06■□□□□ 0.32
LRRK1-211ENST00000538064 ADGRE1Q14246 886 aa17.06■□□□□ 0.32
LRRK1-211ENST00000538064 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
LRRK1-211ENST00000538064 TCTN1Q2MV58 587 aa17.06■□□□□ 0.32
LRRK1-211ENST00000538064 LMBR1Q8WVP7 490 aa17.06■□□□□ 0.32
LRRK1-211ENST00000538064 BRF1Q92994 677 aa17.06■□□□□ 0.32
LRRK1-211ENST00000538064 SMCO2A6NFE2 343 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 RSPH10B2B2RC85 870 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 KIF28PB7ZC32 967 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 LGR5O75473 907 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 RSPH10BP0C881 870 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 SCG2P13521 617 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 PSMA5P28066 241 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
LRRK1-211ENST00000538064 SREBF1P36956 1147 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
LRRK1-211ENST00000538064 ADAM17P78536 824 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 DEFB103AP81534 67 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 SEPT1Q8WYJ6 367 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 PGBD1Q96JS3 809 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 MXRA8Q9BRK3 442 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 JPH1Q9HDC5 661 aaPredicted RBP17.05■□□□□ 0.32
LRRK1-211ENST00000538064 SETD4Q9NVD3 440 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 PKD2L1Q9P0L9 805 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 WDR81Q562E7 1941 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 TRANK1O15050 2925 aa17.05■□□□□ 0.32
LRRK1-211ENST00000538064 NFASCO94856 1347 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 NRCAMQ92823 1304 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 GSTTP1A0A1W2PQM5 241 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 ESYT2A0FGR8 921 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 TLL1O43897 1013 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
LRRK1-211ENST00000538064 KCNH7Q9NS40 1196 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 ERAP1Q9NZ08 941 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 LOXHD1Q8IVV2 1947 aa17.04■□□□□ 0.32
LRRK1-211ENST00000538064 MYH9P35579 1960 aaKnown RBP17.03■□□□□ 0.32
LRRK1-211ENST00000538064 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
LRRK1-211ENST00000538064 TAP1Q03518 808 aa17.03■□□□□ 0.32
LRRK1-211ENST00000538064 IKBKEQ14164 716 aa17.03■□□□□ 0.32
LRRK1-211ENST00000538064 CEP55Q53EZ4 464 aa17.03■□□□□ 0.32
LRRK1-211ENST00000538064 PLEKHG4Q58EX7 1191 aa17.03■□□□□ 0.32
LRRK1-211ENST00000538064 SDF4Q9BRK5 362 aa17.03■□□□□ 0.32
LRRK1-211ENST00000538064 TMEM260Q9NX78 707 aa17.03■□□□□ 0.32
LRRK1-211ENST00000538064 NLRC5Q86WI3 1866 aa17.03■□□□□ 0.32
LRRK1-211ENST00000538064 PRRC2BQ5JSZ5 2229 aaKnown RBP17.02■□□□□ 0.32
LRRK1-211ENST00000538064 VCANP13611 3396 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 PRPF3O43395 683 aaKnown RBP17.02■□□□□ 0.32
LRRK1-211ENST00000538064 ARHGEF15O94989 841 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 GJB5O95377 273 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 CTSHP09668 335 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 IGFBP4P22692 258 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 EVCP57679 992 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 PPFIA1Q13136 1202 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 CYP2W1Q8TAV3 490 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 CCDC12Q8WUD4 166 aaPredicted RBP17.02■□□□□ 0.32
LRRK1-211ENST00000538064 COL25A1Q9BXS0 654 aaPredicted RBP17.02■□□□□ 0.32
LRRK1-211ENST00000538064 ZMYND12Q9H0C1 365 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 SMARCAD1Q9H4L7 1026 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
LRRK1-211ENST00000538064 RALGAPA2Q2PPJ7 1873 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 SPTBN5Q9NRC6 3674 aaKnown RBP17.01■□□□□ 0.31
LRRK1-211ENST00000538064 MEIS1O00470 390 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 MARK3P27448 753 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 ITGB3BPQ13352 177 aaPredicted RBP17.01■□□□□ 0.31
LRRK1-211ENST00000538064 GRIK4Q16099 956 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 NTRK3Q16288 839 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 PKN1Q16512 942 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 FAM26DQ5JW98 314 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 TAF2Q6P1X5 1199 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 NIPA1Q7RTP0 329 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 TMCO2Q7Z6W1 182 aaPredicted RBP17.01■□□□□ 0.31
LRRK1-211ENST00000538064 RPAINQ86UA6 219 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 DBF4BQ8NFT6 615 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 SEPT8Q92599 483 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 GLG1Q92896 1179 aa17.01■□□□□ 0.31
LRRK1-211ENST00000538064 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
LRRK1-211ENST00000538064 AGO4Q9HCK5 861 aaKnown RBP17.01■□□□□ 0.31
LRRK1-211ENST00000538064 LCHNA4D1U4 455 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 MBLAC1A4D2B0 266 aaPredicted RBP17■□□□□ 0.31
LRRK1-211ENST00000538064 EPOPA6NHQ4 379 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 ARP10275 920 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 ACTR2P61160 394 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 JAKMIP3Q5VZ66 844 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 MCTP2Q6DN12 878 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 RUFY4Q6ZNE9 571 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 RUFY3Q7L099 469 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
LRRK1-211ENST00000538064 CRYGNQ8WXF5 182 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 PHKBQ93100 1093 aa17■□□□□ 0.31
LRRK1-211ENST00000538064 PCYT2Q99447 389 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms