RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ERO1AQ96HE7 468 aa17.59■□□□□ 0.41
SFSWAP-206ENST00000537582 DYDC2Q96IM9 177 aa17.59■□□□□ 0.41
SFSWAP-206ENST00000537582 JPH1Q9HDC5 661 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-206ENST00000537582 DISC1Q9NRI5 854 aa17.59■□□□□ 0.41
SFSWAP-206ENST00000537582 WRAP73Q9P2S5 460 aaPredicted RBP17.59■□□□□ 0.41
SFSWAP-206ENST00000537582 SERTAD1Q9UHV2 236 aa17.59■□□□□ 0.41
SFSWAP-206ENST00000537582 NFASCO94856 1347 aa17.59■□□□□ 0.41
SFSWAP-206ENST00000537582 RBM47A0AV96 593 aaKnown RBP17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 POTEFA5A3E0 1075 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 FOXN1O15353 648 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 ACTN4O43707 911 aaKnown RBP17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 FARP2O94887 1054 aaPredicted RBP17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 ZNF865P0CJ78 1059 aaPredicted RBP17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 CTTNQ14247 550 aaKnown RBP17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 CCDC144BQ3MJ40 725 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 KRT79Q5XKE5 535 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 POTEGQ6S5H5 508 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 MIER3Q7Z3K6 550 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 CATSPER3Q86XQ3 398 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 TRPV1Q8NER1 839 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 RASSF8Q8NHQ8 419 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 SCFD2Q8WU76 684 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 ERCC4Q92889 916 aaPredicted RBP17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 ABHD16BQ9H3Z7 469 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 SLC9A2Q9UBY0 812 aa17.58■□□□□ 0.41
SFSWAP-206ENST00000537582 TGFB3P10600 412 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 SMPD1P17405 629 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 TXLNAP40222 546 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 ACTR2P61160 394 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 TTLL4Q14679 1199 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 UGCGQ16739 394 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 BANK1Q8NDB2 785 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 STAMQ92783 540 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 SENP7Q9BQF6 1050 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 SAMM50Q9Y512 469 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 KINO60870 393 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 KRT76Q01546 638 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 EPHA7Q15375 998 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 TMEM119Q4V9L6 283 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 CELF3Q5SZQ8 465 aaKnown RBP17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 RRAGBQ5VZM2 374 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 ZNF746Q6NUN9 644 aaPredicted RBP17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 PDXDC2PQ6P474 469 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 KRBA2Q6ZNG9 492 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 HSD17B14Q9BPX1 270 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 CLSTN2Q9H4D0 955 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 KIAA1024Q9UPX6 916 aa17.57■□□□□ 0.4
SFSWAP-206ENST00000537582 CENPFP49454 3210 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 ZBTB39O15060 712 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 SLITRK3O94933 977 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 STAT6P42226 847 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 PSMC6P62333 389 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 ARHGAP1Q07960 439 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 NEDD9Q14511 834 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 HSDL1Q3SXM5 330 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 METTL7BQ6UX53 244 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 TPH2Q8IWU9 490 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 MTRQ99707 1265 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 MLXIPQ9HAP2 919 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 BLOC1S4Q9NUP1 217 aa17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 DDX19AQ9NUU7 478 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-206ENST00000537582 GSTTP1A0A1W2PQM5 241 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 WDR64B1ANS9 1081 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 E9PMD0 336 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 PRR29P0C7W0 189 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 RPA1P27694 616 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 CASP1P29466 404 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 IRX5P78411 483 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 IRF5Q13568 498 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 HYIQ5T013 277 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 KCNV1Q6PIU1 500 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 CCDC60Q8IWA6 550 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 DHX37Q8IY37 1157 aaKnown RBP17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 CNNM3Q8NE01 707 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 ERMNQ8TAM6 284 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 CALML4Q96GE6 196 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 LXNQ9BS40 222 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 NUP62CLQ9H1M0 184 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 CCDC39Q9UFE4 941 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 TRIM17Q9Y577 477 aa17.55■□□□□ 0.4
SFSWAP-206ENST00000537582 ADCY3O60266 1144 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 CYBAP13498 195 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 HOXD10P28358 340 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 AFMP43652 599 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 JAK3P52333 1124 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 CCDC183Q5T5S1 534 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 HAUS3Q68CZ6 603 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 ABHD15Q6UXT9 468 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 IQUBQ8NA54 791 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 CDK5RAP3Q96JB5 506 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 SPATA33Q96N06 139 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 POLR3CQ9BUI4 534 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 TCEAL9Q9UHQ7 104 aa17.54■□□□□ 0.4
SFSWAP-206ENST00000537582 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 TMEM150BA6NC51 233 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 SLFN14P0C7P3 912 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 SUPT20HL2P0C7V6 817 aa17.53■□□□□ 0.4
SFSWAP-206ENST00000537582 TNFAIP2Q03169 654 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms