RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 NXPE3Q969Y0 559 aa9.7□□□□□ -0.86
LMO3-216ENST00000537568 LBHD1Q9BQE6 289 aaPredicted RBP9.7□□□□□ -0.86
LMO3-216ENST00000537568 ZNF576Q9H609 170 aa9.7□□□□□ -0.86
LMO3-216ENST00000537568 OSGEPQ9NPF4 335 aa9.7□□□□□ -0.86
LMO3-216ENST00000537568 PPP2R3BQ9Y5P8 575 aa9.7□□□□□ -0.86
LMO3-216ENST00000537568 FASNP49327 2511 aaKnown RBP9.7□□□□□ -0.86
LMO3-216ENST00000537568 A0A096LPE4 126 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 A0A1W2PPZ6 126 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 GNAT3A8MTJ3 354 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 EIF5BO60841 1220 aaKnown RBP9.69□□□□□ -0.86
LMO3-216ENST00000537568 F13A1P00488 732 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 CETPP11597 493 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 ITPKAP23677 461 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 MOGSQ13724 837 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 SUPT20HL1Q3ZLR7 823 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 TNNI3KQ59H18 835 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 BNC2Q6ZN30 1099 aaPredicted RBP9.69□□□□□ -0.86
LMO3-216ENST00000537568 SLITRK4Q8IW52 837 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.69□□□□□ -0.86
LMO3-216ENST00000537568 MICAL1Q8TDZ2 1067 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 JARID2Q92833 1246 aaPredicted RBP9.69□□□□□ -0.86
LMO3-216ENST00000537568 FERD3LQ96RJ6 166 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 ST7Q9NRC1 585 aa9.69□□□□□ -0.86
LMO3-216ENST00000537568 ACACBO00763 2458 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 RIF1Q5UIP0 2472 aaKnown RBP9.68□□□□□ -0.86
LMO3-216ENST00000537568 CACNA1HO95180 2353 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 DHX15O43143 795 aaKnown RBP9.68□□□□□ -0.86
LMO3-216ENST00000537568 MARCH6O60337 910 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 U2AF1L5P0DN76 240 aaPredicted RBP9.68□□□□□ -0.86
LMO3-216ENST00000537568 U2AF1Q01081 240 aaKnown RBP eCLIP9.68□□□□□ -0.86
LMO3-216ENST00000537568 UVSSAQ2YD98 709 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 KIF6Q6ZMV9 814 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 LRP10Q7Z4F1 713 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 VN1R5Q7Z5H4 357 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 MORC1Q86VD1 984 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 CELF2-AS1Q8N7Q2 184 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 FAM169BQ8N8A8 192 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 BSNDQ8WZ55 320 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 UTP4Q969X6 686 aaKnown RBP9.68□□□□□ -0.86
LMO3-216ENST00000537568 FAM46AQ96IP4 442 aaKnown RBP9.68□□□□□ -0.86
LMO3-216ENST00000537568 PRDM12Q9H4Q4 367 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 STOML1Q9UBI4 398 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 PCDHB5Q9Y5E4 795 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 SNCAIPQ9Y6H5 919 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 TRANK1O15050 2925 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 MAST2Q6P0Q8 1798 aa9.68□□□□□ -0.86
LMO3-216ENST00000537568 CLRN2A0PK11 232 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 WDHD1O75717 1129 aaPredicted RBP9.67□□□□□ -0.86
LMO3-216ENST00000537568 FAAP100Q0VG06 881 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 NFKBIBQ15653 356 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 L1TD1Q5T7N2 865 aaKnown RBP9.67□□□□□ -0.86
LMO3-216ENST00000537568 NLRP10Q86W26 655 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 TEPSINQ96N21 525 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 DNAJC7Q99615 494 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 KANSL2Q9H9L4 492 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
LMO3-216ENST00000537568 FANCLQ9NW38 375 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 ISY1Q9ULR0 285 aaKnown RBP9.67□□□□□ -0.86
LMO3-216ENST00000537568 COL4A3BPQ9Y5P4 624 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 MGAMO43451 1857 aa9.67□□□□□ -0.86
LMO3-216ENST00000537568 PDHXO00330 501 aa9.66□□□□□ -0.86
LMO3-216ENST00000537568 CDC45O75419 566 aa9.66□□□□□ -0.86
LMO3-216ENST00000537568 EPHB4P54760 987 aa9.66□□□□□ -0.86
LMO3-216ENST00000537568 RPS26P62854 115 aaKnown RBP9.66□□□□□ -0.86
LMO3-216ENST00000537568 C19orf57Q0VDD7 668 aa9.66□□□□□ -0.86
LMO3-216ENST00000537568 IKBKEQ14164 716 aa9.66□□□□□ -0.86
LMO3-216ENST00000537568 SF3B3Q15393 1217 aaKnown RBP9.66□□□□□ -0.86
LMO3-216ENST00000537568 CC2D1BQ5T0F9 858 aaKnown RBP9.66□□□□□ -0.86
LMO3-216ENST00000537568 TRIM42Q8IWZ5 723 aa9.66□□□□□ -0.86
LMO3-216ENST00000537568 BHLHE41Q9C0J9 482 aaPredicted RBP9.66□□□□□ -0.86
LMO3-216ENST00000537568 MIR1-1HGQ9H1L0 117 aa9.66□□□□□ -0.86
LMO3-216ENST00000537568 ACTR10Q9NZ32 417 aa9.66□□□□□ -0.86
LMO3-216ENST00000537568 DOCK3Q8IZD9 2030 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 DNAJC6O75061 913 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 MYL6BP14649 208 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 ARL4DP49703 201 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 IFRD2Q12894 506 aaPredicted RBP9.65□□□□□ -0.86
LMO3-216ENST00000537568 SNAPC2Q13487 334 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 STRIP1Q5VSL9 837 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 ANKRD23Q86SG2 305 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 WDR63Q8IWG1 891 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 MYRFLQ96LU7 910 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 KCNH6Q9H252 994 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 SLKQ9H2G2 1235 aaPredicted RBP9.65□□□□□ -0.86
LMO3-216ENST00000537568 TMEM39AQ9NV64 488 aa9.65□□□□□ -0.86
LMO3-216ENST00000537568 RRP7AQ9Y3A4 280 aaKnown RBP9.65□□□□□ -0.86
LMO3-216ENST00000537568 SH3TC1Q8TE82 1336 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 MYO3BQ8WXR4 1341 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 VPS13AQ96RL7 3174 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 IGLV1-40P01703 118 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 CYP2C8P10632 490 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 PREPP48147 710 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 RPS8P62241 208 aaKnown RBP9.64□□□□□ -0.87
LMO3-216ENST00000537568 SEPT6Q14141 434 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 KCTD2Q14681 263 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 CWF19L2Q2TBE0 894 aaKnown RBP9.64□□□□□ -0.87
LMO3-216ENST00000537568 PLEKHG4Q58EX7 1191 aa9.64□□□□□ -0.87
LMO3-216ENST00000537568 LARP1BQ659C4 914 aaKnown RBP9.64□□□□□ -0.87
LMO3-216ENST00000537568 GK5Q6ZS86 529 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms