RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 CCDC8Q9H0W5 538 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-217ENST00000537162 HCSTQ9UBK5 93 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 CCPG1Q9ULG6 757 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 ISY1Q9ULR0 285 aaKnown RBP11.33□□□□□ -0.6
CPSF7-217ENST00000537162 DMXL2Q8TDJ6 3036 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 SPTLC1O15269 473 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 EOMESO95936 686 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 SRGAP2BP0DMP2 458 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 FDX1P10109 184 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 STAT2P52630 851 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 SLC9C2Q5TAH2 1124 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 RPAP2Q8IXW5 612 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-217ENST00000537162 GMCL1P1Q8NEA9 526 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 ATP6V0A1Q93050 837 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 KATNAL1Q9BW62 490 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-217ENST00000537162 EPC1Q9H2F5 836 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 KCNK12Q9HB15 430 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 CYP26B1Q9NR63 512 aa11.32□□□□□ -0.6
CPSF7-217ENST00000537162 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
CPSF7-217ENST00000537162 LOC102724159A0A0B4J2E5 919 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 CHGBP05060 677 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 GHRP10912 638 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
CPSF7-217ENST00000537162 IKQ13123 557 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-217ENST00000537162 PWP2Q15269 919 aaKnown RBP11.31□□□□□ -0.6
CPSF7-217ENST00000537162 RARS2Q5T160 578 aaKnown RBP11.31□□□□□ -0.6
CPSF7-217ENST00000537162 CES5AQ6NT32 575 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 SEPT14Q6ZU15 432 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 RTN4RL1Q86UN2 441 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-217ENST00000537162 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 STAG1Q8WVM7 1258 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 RSAD2Q8WXG1 361 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 SECISBP2LQ93073 1101 aaKnown RBP11.31□□□□□ -0.6
CPSF7-217ENST00000537162 MKL1Q969V6 931 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 DBR1Q9UK59 544 aaKnown RBP11.31□□□□□ -0.6
CPSF7-217ENST00000537162 PRR12Q9ULL5 1215 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 SIT1Q9Y3P8 196 aa11.31□□□□□ -0.6
CPSF7-217ENST00000537162 IGSF10Q6WRI0 2623 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 SORBS3O60504 671 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 FGF18O76093 207 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 MBD4O95243 580 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 CHRNA1P02708 482 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 RFX1P22670 979 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 HOXC8P31273 242 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 MTHFRP42898 656 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 ITIH3Q06033 890 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 LPAL2Q16609 132 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 CLEC4DQ8WXI8 215 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 FOXQ1Q9C009 403 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 ATP8A2Q9NTI2 1148 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 TMEM260Q9NX78 707 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 HCFC2Q9Y5Z7 792 aa11.3□□□□□ -0.6
CPSF7-217ENST00000537162 FNDC1Q4ZHG4 1894 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-217ENST00000537162 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 FSD2A1L4K1 749 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 C17orf102A2RUQ5 167 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 LILRB5O75023 590 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 ICAM1P05362 532 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 CSTF1Q05048 431 aaKnown RBP11.29□□□□□ -0.6
CPSF7-217ENST00000537162 UBE3AQ05086 875 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 DDX10Q13206 875 aaKnown RBP11.29□□□□□ -0.6
CPSF7-217ENST00000537162 LPIN1Q14693 890 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 ZNF528Q3MIS6 628 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 FAM26DQ5JW98 314 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 FAM160B2Q86V87 743 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 ZBTB44Q8NCP5 570 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 CHURC1Q8WUH1 139 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 PRKRIP1Q9H875 184 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-217ENST00000537162 MTMR4Q9NYA4 1195 aa11.29□□□□□ -0.6
CPSF7-217ENST00000537162 C2orf16Q68DN1 1984 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 TENM4Q6N022 2769 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 HOXD8P13378 290 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-217ENST00000537162 SPINK2P20155 84 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 MCCP23508 829 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 RPS6P62753 249 aaKnown RBP11.28□□□□□ -0.6
CPSF7-217ENST00000537162 TMED8Q6PL24 325 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-217ENST00000537162 ATRIPQ8WXE1 791 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 CASP10Q92851 521 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 MAP4K1Q92918 833 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 EAF2Q96CJ1 260 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-217ENST00000537162 C16orf70Q9BSU1 422 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 RNPEPQ9H4A4 650 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 EHMT1Q9H9B1 1298 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 PCDHGA2Q9Y5H1 932 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 ADAMTS20P59510 1910 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 ZBED9Q6R2W3 1325 aa11.28□□□□□ -0.6
CPSF7-217ENST00000537162 SMIM10L2AP0DMW4 78 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 SMIM10L2BP0DMW5 78 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 CCDC6Q16204 474 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 PHLDB3Q6NSJ2 640 aa11.27□□□□□ -0.61
CPSF7-217ENST00000537162 XRRA1Q6P2D8 792 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms