RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PCYT2Q99447 389 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
UBE3B-206ENST00000536398 SETD4Q9NVD3 440 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
UBE3B-206ENST00000536398 CDH23Q9H251 3354 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-206ENST00000536398 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-206ENST00000536398 C17orf102A2RUQ5 167 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
UBE3B-206ENST00000536398 DEXIO95424 95 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 SELPP16109 830 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 MARK3P27448 753 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 HOXC8P31273 242 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 PBX2P40425 430 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 NEK4P51957 841 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 ME3Q16798 604 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 ZNF618Q5T7W0 954 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 TRAF7Q6Q0C0 670 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 CCDC148Q8NFR7 591 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 CAGE1Q8TC20 777 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 ATP6V0A1Q93050 837 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 TTYH1Q9H313 450 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-206ENST00000536398 SH3GLB2Q9NR46 395 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 SLC9A2Q9UBY0 812 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 SCN5AQ14524 2016 aa16.26■□□□□ 0.19
UBE3B-206ENST00000536398 NFASCO94856 1347 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 NBNO60934 754 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 CCNE2O96020 404 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 ACTR2P61160 394 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 NPY5RQ15761 445 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 TCTN1Q2MV58 587 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 LRRC8DQ7L1W4 858 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 SERINC5Q86VE9 423 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 AFAP1L1Q8TED9 768 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 LMBR1Q8WVP7 490 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 SDF4Q9BRK5 362 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 FTOQ9C0B1 505 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBE3B-206ENST00000536398 GJB4Q9NTQ9 266 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 PCDHA4Q9UN74 947 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 KCNJ14Q9UNX9 436 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 TRIP12Q14669 1992 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-206ENST00000536398 COL6A3P12111 3177 aa16.25■□□□□ 0.19
UBE3B-206ENST00000536398 ZBBXA8MT70 800 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 DHX15O43143 795 aaKnown RBP16.24■□□□□ 0.19
UBE3B-206ENST00000536398 RFC2P35250 354 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 THPOP40225 353 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 RBL2Q08999 1139 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 MBTPS1Q14703 1052 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 ANKRD1Q15327 319 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 CPLX2Q6PUV4 134 aaKnown RBP16.24■□□□□ 0.19
UBE3B-206ENST00000536398 NIPA1Q7RTP0 329 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 GLG1Q92896 1179 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 ZBTB10Q96DT7 871 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 PBX4Q9BYU1 374 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 OSBPL7Q9BZF2 842 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
UBE3B-206ENST00000536398 ZNF215Q9UL58 517 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-206ENST00000536398 M0R2N6 131 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 LGR5O75473 907 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 PFKMP08237 780 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 FDPSP14324 419 aaKnown RBP16.23■□□□□ 0.19
UBE3B-206ENST00000536398 RABGGTBP53611 331 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 ADAM17P78536 824 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 PRR16Q569H4 304 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 MCTP2Q6DN12 878 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 BLIDQ8IZY5 108 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 LENG9Q96B70 501 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 KIF2CQ99661 725 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 SMARCAD1Q9H4L7 1026 aa16.23■□□□□ 0.19
UBE3B-206ENST00000536398 TET1Q8NFU7 2136 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 IPO5O00410 1097 aaKnown RBP16.22■□□□□ 0.19
UBE3B-206ENST00000536398 EIF5BO60841 1220 aaKnown RBP16.22■□□□□ 0.19
UBE3B-206ENST00000536398 CDKL5O76039 1030 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 ATG7O95352 703 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 MYOGP15173 224 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 DNAJB2P25686 324 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 CIITAP33076 1130 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 ST3GAL1Q11201 340 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 RUFY4Q6ZNE9 571 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 TBCKQ8TEA7 893 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 GJA10Q969M2 543 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 ZNF577Q9BSK1 485 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 ERAP1Q9NZ08 941 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 SLC4A7Q9Y6M7 1214 aa16.22■□□□□ 0.19
UBE3B-206ENST00000536398 CXCL10P02778 98 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 IGBP1P78318 339 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 PPFIA1Q13136 1202 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 GRIK4Q16099 956 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 MARCH8Q5T0T0 291 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 ABHD15Q6UXT9 468 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 DAGLBQ8NCG7 672 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 GTF3C6Q969F1 213 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 TIFAQ96CG3 184 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 PHF20Q9BVI0 1012 aa16.21■□□□□ 0.19
UBE3B-206ENST00000536398 MTIF3Q9H2K0 278 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms