RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 RRP1P56182 461 aaKnown RBP9.29□□□□□ -0.92
CHFR-211ENST00000535897 DLX2Q07687 328 aaPredicted RBP9.29□□□□□ -0.92
CHFR-211ENST00000535897 HYAL1Q12794 435 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 TRDNQ13061 729 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 COL19A1Q14993 1142 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 SMAD2Q15796 467 aaKnown RBP9.29□□□□□ -0.92
CHFR-211ENST00000535897 RSPH3Q86UC2 560 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 GPR20Q99678 358 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 DSCC1Q9BVC3 393 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 LMAN2LQ9H0V9 348 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 KCNH6Q9H252 994 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 SUPT16HQ9Y5B9 1047 aaKnown RBP9.29□□□□□ -0.92
CHFR-211ENST00000535897 KAT6AQ92794 2004 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 NRCAMQ92823 1304 aa9.29□□□□□ -0.92
CHFR-211ENST00000535897 ZNF318Q5VUA4 2279 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
CHFR-211ENST00000535897 SPATA31C2B4DYI2 1134 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 C5orf67F2Z3F1 127 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 STXBP3O00186 592 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 LINC01565O15544 149 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 MBTPS2O43462 519 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 TBX10O75333 385 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 STAM2O75886 525 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 IBSPP21815 317 aaPredicted RBP9.28□□□□□ -0.92
CHFR-211ENST00000535897 MRPS9P82933 396 aaKnown RBP9.28□□□□□ -0.92
CHFR-211ENST00000535897 PPFIA1Q13136 1202 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 SMAD4Q13485 552 aaKnown RBP9.28□□□□□ -0.92
CHFR-211ENST00000535897 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 SMARCC2Q8TAQ2 1214 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 PPP2R3CQ969Q6 453 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 MTMR8Q96EF0 704 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 INPP4AQ96PE3 977 aaPredicted RBP9.28□□□□□ -0.92
CHFR-211ENST00000535897 ALG13Q9NP73 1137 aaKnown RBP9.28□□□□□ -0.92
CHFR-211ENST00000535897 CD207Q9UJ71 328 aa9.28□□□□□ -0.92
CHFR-211ENST00000535897 BAZ2BQ9UIF8 2168 aaKnown RBP9.28□□□□□ -0.92
CHFR-211ENST00000535897 IFIT3O14879 490 aaKnown RBP9.27□□□□□ -0.93
CHFR-211ENST00000535897 CHRNA1P02708 482 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 MMP1P03956 469 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 MARK3P27448 753 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 ICAM3P32942 547 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 GTF2F1P35269 517 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHFR-211ENST00000535897 TCF7P36402 384 aaPredicted RBP9.27□□□□□ -0.93
CHFR-211ENST00000535897 IGBP1P78318 339 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 LPIN1Q14693 890 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 GRM4Q14833 912 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 SEC23AQ15436 765 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 CTC1Q2NKJ3 1217 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 HERC4Q5GLZ8 1057 aaPredicted RBP9.27□□□□□ -0.93
CHFR-211ENST00000535897 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 TAF2Q6P1X5 1199 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 RUFY4Q6ZNE9 571 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 CYB5R4Q7L1T6 521 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 RALYLQ86SE5 291 aaKnown RBP9.27□□□□□ -0.93
CHFR-211ENST00000535897 NLRX1Q86UT6 975 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 GIMAP8Q8ND71 665 aaPredicted RBP9.27□□□□□ -0.93
CHFR-211ENST00000535897 GLG1Q92896 1179 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 CUL5Q93034 780 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 TUBE1Q9UJT0 475 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 TELO2Q9Y4R8 837 aa9.27□□□□□ -0.93
CHFR-211ENST00000535897 ENPP3O14638 875 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 SEMA3FQ13275 785 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 WTAPQ15007 396 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 SART3Q15020 963 aaKnown RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 GRIK4Q16099 956 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 PAN2Q504Q3 1202 aaKnown RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 PCNX4Q63HM2 1172 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 TSHZ1Q6ZSZ6 1077 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 CATIPQ7Z7H3 387 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 RBM23Q86U06 439 aaKnown RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 CHD1LQ86WJ1 897 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 SUGP1Q8IWZ8 645 aaKnown RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 DNAJB3Q8WWF6 145 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 EDAQ92838 391 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 CLP1Q92989 425 aaKnown RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 PBXIP1Q96AQ6 731 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 PLVAPQ9BX97 442 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 FAM49AQ9H0Q0 323 aaPredicted RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 RWDD1Q9H446 243 aaPredicted RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 RIOX1Q9H6W3 641 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 ERAP1Q9NZ08 941 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 SEC63Q9UGP8 760 aaKnown RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 PLAGL2Q9UPG8 496 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 MRPL42Q9Y6G3 142 aaKnown RBP9.26□□□□□ -0.93
CHFR-211ENST00000535897 FRMPD4Q14CM0 1322 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 KIAA1671Q9BY89 1806 aa9.26□□□□□ -0.93
CHFR-211ENST00000535897 TMEM221A6NGB7 291 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 M0QZ92 97 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 M0R296 226 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 CYTH3O43739 400 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 PPFIA3O75145 1194 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 DGKIO75912 1065 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 LINC00271P0C7V0 271 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 CD52P31358 61 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 NRIP1P48552 1158 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 ADAM17P78536 824 aa9.25□□□□□ -0.93
CHFR-211ENST00000535897 MRPS6P82932 125 aaKnown RBP9.25□□□□□ -0.93
CHFR-211ENST00000535897 TMEM62Q0P6H9 643 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms