RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 UBE2ZQ9H832 354 aaPredicted RBP14.43□□□□□ -0.1
USF1-211ENST00000534633 SETD4Q9NVD3 440 aa14.43□□□□□ -0.1
USF1-211ENST00000534633 SEC63Q9UGP8 760 aaKnown RBP14.43□□□□□ -0.1
USF1-211ENST00000534633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.42□□□□□ -0.1
USF1-211ENST00000534633 MEIS2O14770 477 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 CTSHP09668 335 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 GNAQP50148 359 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 ADAM17P78536 824 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 FAM26DQ5JW98 314 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 USP17L6PQ6QN14 398 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 TRIM50Q86XT4 487 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 TMTC2Q8N394 836 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 LMBR1Q8WVP7 490 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 APBB2Q92870 758 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 TOP1MTQ969P6 601 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 MYL10Q9BUA6 226 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 RAPGEFL1Q9UHV5 662 aa14.42□□□□□ -0.1
USF1-211ENST00000534633 NRCAMQ92823 1304 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 RBAK-RBAKDNI3L0D1 243 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 ARHGAP4P98171 946 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 PTPROQ16827 1216 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 C8orf34Q49A92 452 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 EPC2Q52LR7 807 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 UTP14CQ5TAP6 766 aaKnown RBP14.41□□□□□ -0.1
USF1-211ENST00000534633 GPRASP2Q96D09 838 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 MRPL38Q96DV4 380 aaKnown RBP14.41□□□□□ -0.1
USF1-211ENST00000534633 CDHR1Q96JP9 859 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 TMEM87BQ96K49 555 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 YME1L1Q96TA2 773 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 OSBPL7Q9BZF2 842 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 SNX14Q9Y5W7 946 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 TTC3P53804 2025 aa14.41□□□□□ -0.1
USF1-211ENST00000534633 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.4□□□□□ -0.1
USF1-211ENST00000534633 CCDC69A6NI79 296 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 EPB41L2O43491 1005 aaKnown RBP14.4□□□□□ -0.1
USF1-211ENST00000534633 PRC1O43663 620 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 UPP2O95045 317 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 REC8O95072 547 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 MCM5P33992 734 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 TCF7P36402 384 aaPredicted RBP14.4□□□□□ -0.1
USF1-211ENST00000534633 EXOSC10Q01780 885 aaKnown RBP14.4□□□□□ -0.1
USF1-211ENST00000534633 SP4Q02446 784 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 LEXMQ3ZCV2 418 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 RPAINQ86UA6 219 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 IFIH1Q9BYX4 1025 aaKnown RBP14.4□□□□□ -0.1
USF1-211ENST00000534633 TELO2Q9Y4R8 837 aa14.4□□□□□ -0.1
USF1-211ENST00000534633 H3BNC9 293 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 SH2B2O14492 632 aaPredicted RBP14.39□□□□□ -0.11
USF1-211ENST00000534633 PLEKHA8P1O95397 391 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 CALM1P0DP23 149 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 CALM2P0DP24 149 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 CALM3P0DP25 149 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 KCNA2P16389 499 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 LIFRP42702 1097 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 TIGD5Q53EQ6 642 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 TAF2Q6P1X5 1199 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 NFXL1Q6ZNB6 911 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 TMEM192Q8IY95 271 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 SRBD1Q8N5C6 995 aaKnown RBP14.39□□□□□ -0.11
USF1-211ENST00000534633 EPHX3Q9H6B9 360 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 PSTPIP2Q9H939 334 aa14.39□□□□□ -0.11
USF1-211ENST00000534633 KIAA1671Q9BY89 1806 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 ATP9AO75110 1047 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 CHRNA1P02708 482 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 CPA1P15085 419 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 KCNA5P22460 613 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 PLA2G5P39877 138 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 PPFIA1Q13136 1202 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 GPM6BQ13491 265 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 RNF20Q5VTR2 975 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 SEPT1Q8WYJ6 367 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 NEK1Q96PY6 1258 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 LRFN3Q9BTN0 628 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 ERAP1Q9NZ08 941 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 MYO7AQ13402 2215 aa14.38□□□□□ -0.11
USF1-211ENST00000534633 GSTTP1A0A1W2PQM5 241 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 SPDYE3A6NKU9 549 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 MAFGO15525 162 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 RPLP2P05387 115 aaKnown RBP14.37□□□□□ -0.11
USF1-211ENST00000534633 ITGB5P18084 799 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 MGAT3Q09327 533 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 MTMR1Q13613 665 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 TMEM31Q5JXX7 168 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 RSPH3Q86UC2 560 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 CMTR1Q8N1G2 835 aaKnown RBP14.37□□□□□ -0.11
USF1-211ENST00000534633 BANK1Q8NDB2 785 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.37□□□□□ -0.11
USF1-211ENST00000534633 LRRC2Q9BYS8 371 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 SMARCAD1Q9H4L7 1026 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 EHMT1Q9H9B1 1298 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 TUBE1Q9UJT0 475 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 UBIAD1Q9Y5Z9 338 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 SLC12A7Q9Y666 1083 aa14.37□□□□□ -0.11
USF1-211ENST00000534633 MBLAC1A4D2B0 266 aaPredicted RBP14.36□□□□□ -0.11
USF1-211ENST00000534633 GHRP10912 638 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 RXRAP19793 462 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 GRIK4Q16099 956 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 UBE2SQ16763 222 aa14.36□□□□□ -0.11
USF1-211ENST00000534633 PUS10Q3MIT2 529 aaKnown RBP14.36□□□□□ -0.11
USF1-211ENST00000534633 RUFY4Q6ZNE9 571 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms