RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CXCL10P02778 98 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 SMIM10L2AP0DMW4 78 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 SMIM10L2BP0DMW5 78 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 PDIA3P30101 505 aaKnown RBP16.09■□□□□ 0.17
SF3B2-215ENST00000534307 AP3B2Q13367 1082 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 TOB2Q14106 344 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-215ENST00000534307 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 NECAB3Q96P71 396 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-215ENST00000534307 ANO3Q9BYT9 981 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 TM6SF1Q9BZW5 370 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 GLT8D2Q9H1C3 349 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 NAP1L2Q9ULW6 460 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-215ENST00000534307 YBX2Q9Y2T7 364 aaKnown RBP16.09■□□□□ 0.17
SF3B2-215ENST00000534307 PTPRSQ13332 1948 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 WDFY4Q6ZS81 3184 aa16.09■□□□□ 0.17
SF3B2-215ENST00000534307 ADAMTS3O15072 1205 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 PRPF3O43395 683 aaKnown RBP16.08■□□□□ 0.16
SF3B2-215ENST00000534307 NBNO60934 754 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 PARNO95453 639 aaKnown RBP16.08■□□□□ 0.16
SF3B2-215ENST00000534307 ACTN1P12814 892 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 ATP2A2P16615 1042 aaKnown RBP16.08■□□□□ 0.16
SF3B2-215ENST00000534307 SREBF1P36956 1147 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 ADAM17P78536 824 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 SP4Q02446 784 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 MBTPS1Q14703 1052 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 RAB30Q15771 203 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 CCDC85BQ15834 202 aaPredicted RBP16.08■□□□□ 0.16
SF3B2-215ENST00000534307 CYP2W1Q8TAV3 490 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 CRYGNQ8WXF5 182 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 PGBD1Q96JS3 809 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 MXRA8Q9BRK3 442 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 ZMYND12Q9H0C1 365 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 EHMT1Q9H9B1 1298 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 TMEM260Q9NX78 707 aa16.08■□□□□ 0.16
SF3B2-215ENST00000534307 GSTTP1A0A1W2PQM5 241 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 C17orf102A2RUQ5 167 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 ZBBXA8MT70 800 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 BAIAP3O94812 1187 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 CENPBP07199 599 aaPredicted RBP16.07■□□□□ 0.16
SF3B2-215ENST00000534307 IFNAR1P17181 557 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 TCF7P36402 384 aaPredicted RBP16.07■□□□□ 0.16
SF3B2-215ENST00000534307 RABGGTBP53611 331 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 TCTN1Q2MV58 587 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 CEP55Q53EZ4 464 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 ZNF618Q5T7W0 954 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 PHKBQ93100 1093 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 KCNH7Q9NS40 1196 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 MSRAQ9UJ68 235 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 ZNF215Q9UL58 517 aaPredicted RBP16.07■□□□□ 0.16
SF3B2-215ENST00000534307 PCDHA11Q9Y5I1 949 aa16.07■□□□□ 0.16
SF3B2-215ENST00000534307 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 MEIS1O00470 390 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 TREHO43280 583 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 PHOSPHO2Q8TCD6 241 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 ATP6V0A1Q93050 837 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 SLC9A7Q96T83 725 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 RNF26Q9BY78 433 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-215ENST00000534307 FTOQ9C0B1 505 aaKnown RBP eCLIP16.06■□□□□ 0.16
SF3B2-215ENST00000534307 NKX2-4Q9H2Z4 354 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 NCOA5Q9HCD5 579 aaKnown RBP16.06■□□□□ 0.16
SF3B2-215ENST00000534307 SETD4Q9NVD3 440 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 PKD2L1Q9P0L9 805 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 CYP46A1Q9Y6A2 500 aa16.06■□□□□ 0.16
SF3B2-215ENST00000534307 NFASCO94856 1347 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 ARP10275 920 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 MYOGP15173 224 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 ARHGAP4P98171 946 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 ITGB3BPQ13352 177 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-215ENST00000534307 MKRN4PQ13434 485 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-215ENST00000534307 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
SF3B2-215ENST00000534307 CNKSR3Q6P9H4 555 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 NIPA1Q7RTP0 329 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 LMBR1Q8WVP7 490 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 PCYT2Q99447 389 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 C1QTNF1Q9BXJ1 281 aa16.05■□□□□ 0.16
SF3B2-215ENST00000534307 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
SF3B2-215ENST00000534307 AGO4Q9HCK5 861 aaKnown RBP16.05■□□□□ 0.16
SF3B2-215ENST00000534307 JPH1Q9HDC5 661 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-215ENST00000534307 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 IGLV3-22A0A075B6J6 115 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 FAM86B1E9PN63 330 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 CAND2O75155 1236 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 LGR5O75473 907 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 CYP3A4P08684 503 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 FAM86B2P0C5J1 330 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 IGFBP4P22692 258 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 THPOP40225 353 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 WDR5P61964 334 aaKnown RBP16.04■□□□□ 0.16
SF3B2-215ENST00000534307 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
SF3B2-215ENST00000534307 JAKMIP3Q5VZ66 844 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 IL27Q8NEV9 243 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
SF3B2-215ENST00000534307 ERAP1Q9NZ08 941 aa16.04■□□□□ 0.16
SF3B2-215ENST00000534307 NRCAMQ92823 1304 aa16.03■□□□□ 0.16
SF3B2-215ENST00000534307 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
SF3B2-215ENST00000534307 PPFIA3O75145 1194 aa16.03■□□□□ 0.16
SF3B2-215ENST00000534307 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms