RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 EPHB1P54762 984 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 NFIXQ14938 502 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 MMP19Q99542 508 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 TRIM56Q9BRZ2 755 aaKnown RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 VCXQ9H320 206 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 RNF146Q9NTX7 359 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 MAGED2Q9UNF1 606 aaPredicted RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 HECW2Q9P2P5 1572 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PLEKHG2Q9H7P9 1386 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 JCADQ9P266 1359 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 GCC2Q8IWJ2 1684 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 WDR64B1ANS9 1081 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 SGK1O00141 431 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 TNPO2O14787 897 aaKnown RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 GRIN3BO60391 1043 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PPFIA4O75335 1185 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 CYP19A1P11511 503 aaPredicted RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PLCG1P19174 1290 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 CASP14P31944 242 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PEX3P56589 373 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PSMD2Q13200 908 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 SMYD4Q8IYR2 804 aaPredicted RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 BHMT2Q9H2M3 363 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 MRPL47Q9HD33 250 aaKnown RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 DPYSL4O14531 572 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 ZBTB5O15062 677 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 CYP2E1P05181 493 aaPredicted RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 FCER1AP12319 257 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 ARHGAP4P98171 946 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PDE1BQ01064 536 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 TTLL4Q14679 1199 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 THEM5Q8N1Q8 247 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 NSUN6Q8TEA1 469 aaKnown RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 RUNDC3BQ96NL0 473 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 TTC1Q99614 292 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 RABEP2Q9H5N1 569 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 UBE2TQ9NPD8 197 aaPredicted RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 GCNT4Q9P109 453 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 BCAP29Q9UHQ4 241 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 ANGPTL3Q9Y5C1 460 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 ACTN1P12814 892 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 GBP1P32455 592 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 EFCAB13Q8IY85 973 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 ELMOD1Q8N336 334 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 MCUQ8NE86 351 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 HDAC11Q96DB2 347 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PIDD1Q9HB75 910 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 SMYD2Q9NRG4 433 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PCDHA6Q9UN73 950 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PCDHA8Q9Y5H6 950 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 HOXA7P31268 230 aaPredicted RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PKP1Q13835 747 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 C10orf67Q8IYJ2 551 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 DNAAF3Q8N9W5 541 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 LINC00301Q8NCQ3 95 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 TOPORSQ9NS56 1045 aaPredicted RBP6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 KCNH4Q9UQ05 1017 aa6.92□□□□□ -1.3
UBQLN1-206ENST00000533705 PTCH1Q13635 1447 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 MCF2LO15068 1137 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 PLEKHA8P1O95397 391 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 LDHAP00338 332 aaKnown RBP6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 SMIM5Q71RC9 77 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 PHLDB2Q86SQ0 1253 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 SCN4BQ8IWT1 228 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 MCPH1Q8NEM0 835 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 SPDYE1Q8NFV5 336 aaPredicted RBP6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 UHMK1Q8TAS1 419 aaKnown RBP6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 FAM71BQ8TC56 605 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 MAGOHBQ96A72 148 aaKnown RBP6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 TMEM47Q9BQJ4 181 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 SH3GLB2Q9NR46 395 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 CDHR2Q9BYE9 1310 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 TTC37Q6PGP7 1564 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 SFI1A8K8P3 1242 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 KRT1P04264 644 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 CCNE1P24864 410 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 ARL6IP4Q66PJ3 421 aaKnown RBP6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 RCSD1Q6JBY9 416 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 FASTKD5Q7L8L6 764 aaKnown RBP6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 SP8Q8IXZ3 490 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 TRMT2AQ8IZ69 625 aaKnown RBP6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 STAG1Q8WVM7 1258 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 ELP3Q9H9T3 547 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 SRPRBQ9Y5M8 271 aaKnown RBP6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 UTYO14607 1347 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 TNS3Q68CZ2 1445 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 PRPSAP2O60256 369 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 GFPT2O94808 682 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 IGKV5-2P06315 115 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 TMTC3Q6ZXV5 915 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 GRAMD1CQ8IYS0 662 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 SLC44A5Q8NCS7 719 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 PIGOQ8TEQ8 1089 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 ATP6V1E2Q96A05 226 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 CALN1Q9BXU9 219 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 ATP6V0A4Q9HBG4 840 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 TBC1D22BQ9NU19 505 aa6.91□□□□□ -1.3
UBQLN1-206ENST00000533705 PCDHB6Q9Y5E3 794 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms